Basic information
- Standard SMILES
F[P-](F)(F)(F)(F)F.c1ccc2c(c1)nnn2O[P+](N1CCCC1)(N1CCCC1)N1CCCC1- InChIKey
VIAFLMPQBHAMLI-UHFFFAOYSA-N- Molecular formula
- C18H28F6N6OP2
- Average molar mass
- 520.4 g/mol
- Monoisotopic mass
- 520.17040251
Names & identifiers
- Preferred name
- PyBOP
- IUPAC
- benzotriazol-1-yloxy(tripyrrolidin-1-yl)phosphanium hexafluorophosphate
- English name
- PyBOP
- Molecular formula
- C18H28F6N6OP2
- Molecular weight
- 520.39
Names & synonyms
Show more names
Database identifiers
- CAS
128625-52-5- PubChem CID
- 2724699
- DTXSID
DTXSID40369209- UNII
- Y6KQR4GY6T
- EC Number
- 603-290-2
Properties
Computed structural properties
- Topological polar surface area
- 49.7 Ų
- Hydrogen bond donors
- 0
- Hydrogen bond acceptors
- 13
- Rotatable bonds
- 5
- Heavy atoms
- 33
- Formal charge
- 0
- Complexity
- 500
Physicochemical properties
- Melting point
- 154 · 154-156 °C (dec.)(lit.)
- Density
- 1.438 at · 1.438 at 20℃
- vapor pressure
- 0 · 0-0Pa at 20-50℃
- storage temp.
- 2 · 2-8°C
- solubility
- 25 mg/mL, · methanol: 25 mg/mL, clear
- form
- Fine Crystalline Powder
- color
- White to off-white
- Sensitive
- Moisture Sensitive
- BRN
- 3584612 · 3584612
- Major Application
- peptide synthesis
- InChI
- InChI=1S/C18H28N6OP.F6P/c1-2-10-18-17(9-1)19-20-24(18)25-26(21-11-3-4-12-21,22-13-5-6-14-22)23-15-7-8-16-23;1-7(2,3,4,5)6/h1-2,9-10H,3-8,11-16H2;/q+1;-1
- InChIKey
- BYCLGHOAELJLOF-UHFFFAOYSA-M
- SMILES
- [P+](ON1N=NC2C=CC=CC1=2)(N1CCCC1)(N1CCCC1)N1CCCC1.[P-](F)(F)(F)(F)(F)F
- LogP
- -0.3 at · -0.3 at 26℃ and pH3.5-3.7
- CAS DataBase Reference
- 128625 · 128625-52-5(CAS DataBase Reference)
- UNSPSC Code
- 12352107 · 12352107
- NACRES
- 22 · NA.22
- Symbol(GHS)
- 7 · GHS07,GHS09
- Signal word
- Warning
- Hazard statements
- 302 · H302-H317-H410
- Precautionary statements
- 261 · P261-P264-P273-P280-P301+P312-P302+P352
- PPE
- 95 · dust mask type N95 (US), Eyeshields, Gloves
- Hazard Codes
- Xi
- Risk Statements
- 37 · 37/38-44-36/37/38
- Safety Statements
- 26 · 26-36-24/25-37/39
- RIDADR
- 1325 · UN 1325 4.1/PG 2
- WGK Germany
- 3 · 3
- F
- 8 · 8-10-21
- Hazard Note
- Irritant
- HS Code
- 29339980 · 29339980
- Storage Class
- 11 · 11 - Combustible Solids
- Hazard Classifications
- 4 OralAquatic · Acute Tox. 4 OralAquatic Acute 1Aquatic Chronic 1Skin Sens. 1
- REACH Registrations
- Active
Safety & regulation
GHS classification
GHS Classification
Warning
H302 (14.9%): Harmful if swallowed [Warning Acute toxicity, oral];H315 (87.8%): Causes skin irritation [Warning Skin corrosion/irritation];H317 (12.2%): May cause an allergic skin reaction [Warning Sensitization, Skin];H319 (87.8%): Causes serious eye irritation [Warning Serious eye damage/eye irritation];H335 (86.5%): May cause respiratory irritation [Warning Specific target organ toxicity, single exposure; Respiratory tract irritation];H410 (12.2%): Very toxic to aquatic life with long lasting effects [Warning Hazardous to the aquatic environment, long-term hazard]
P261, P264, P264+P265, P270, P271, P272, P273, P280, P301+P317, P302+P352, P304+P340, P305+P351+P338, P319, P321, P330, P332+P317, P333+P317, P337+P317, P362+P364, P391, P403+P233, P405, and P501 (click each P-code to see the statement)
Aggregated GHS information provided per 74 reports by companies from 13 notifications to the ECHA C&L Inventory. Each notification may be associated with multiple companies.;Information may vary between notifications depending on impurities, additives, and other factors. The percentage value in parenthesis indicates the notified classification ratio from companies that provide hazard codes. Only hazard codes with percentage values above 10% are shown. For more detailed information, please visit ECHA C&L website.
Hazard information
Regulatory information
Safety data
- F
- 8-10-21
- PPE
- dust mask type N95 (US), Eyeshields, Gloves
- wgk
- 3
- ridadr
- UN 1325 4.1/PG 2
- hs_code
- 29339980
- risk_code
- 37/38-44-36/37/38
- Signal word
- Warning
- Symbol(GHS)
- GHS07,GHS09
- hazard_code
- Xi
- hazard_note
- Irritant
- safety_code
- 26-36-24/25-37/39
- Storage Class
- 11 - Combustible Solids
- Hazard statements
- H302-H317-H410
- REACH Registrations
- Active
- Hazard Classifications
- Acute Tox. 4 OralAquatic Acute 1Aquatic Chronic 1Skin Sens. 1
- Precautionary statements
- P261-P264-P273-P280-P301+P312-P302+P352
Chemistry & industry
Applications
UsesOne of the most convenient coupling reagents for peptide synthesis without carcinogenic by-products. It replaces BOP reagent. This is especially suitable for solid-phase peptide synthesis, avoids racemization.
Uses1H-Benzotriazol-1-yloxytri(1-pyrrolidinyl) phosphonium hexafluorophosphate (PyBOP) is a peptide coupling reagent utilized in solid phase peptide synthesis. It is also used as a substitute for the (benzotriazol-1-yloxy)tris(dimethylamino)phosphonium hexafluorophosphate (BOP) reagent.
UsesPyBOP is a reagent for: Synthesis of single labeled oligonucleotides that fluoresce upon matched hybridization Generation of endocrine disruptor chemical binders Cycloaddition to template-assembled multivalent peptide conjugates
General Description(Benzotriazol-1-yloxy)tripyrrolidinophosphonium hexafluorophosphate (PyBOP) is an activator of carboxyl group commonly used in peptide synthesis. It also participates in the carboxylic acid esterification. It shows characteristics similar to benzotriazol-1-yloxy)tris(dimethylamino)phosphonium hexafluorophosphate (BOP) and can be utilized as an alternative to BOP in peptide bond formation.
Suppliers50 total
Additional notes
DefinitionPyBOP (benzotriazol-1-yl-oxytripyrrolidinophosphonium hexafluorophosphate) coupling reagent was selected for the peptidic bond formation. This selection was because PyBOP is efficient and could generate less toxic byproducts. PyBOP is an efficient coupling reagent utilized in solid-phase peptide synthesis. It reacts similarly to BOP, but its byproduct is not highly carcinogenic. PyBOP was utilized in the solid-phase synthesis of the tetrapeptide H-Ile-Ala-Leu-Pro-OH on 2-chlorotrityl resin. In contrast to uronium-based coupling reagents, PyBOP does not form guanidinated byproducts when used in excess. This makes it useful in fragment condensation reactions and head-to-tail cyclizations[1].
Related reactions
Linked notes
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