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1-(2'-Deoxy-beta-D-glucopyranosyl)thymine

HCID 101247
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Basic information

CAS
5116-45-0
Standard SMILES
Cc1cn([C@H]2C[C@@H](O)[C@H](O)[C@@H](CO)O2)c(=O)[nH]c1=O
InChIKey
VVJYUAYZJAKGRQ-BGZDPUMWSA-N
Molecular formula
C11H16N2O6
Average molar mass
272.25 g/mol
Monoisotopic mass
272.10083623

Overview

RN given refers to (beta-D-arabino)-isomer

Names & identifiers

Preferred name
1-(2'-Deoxy-beta-D-glucopyranosyl)thymine
IUPAC
1-[(2R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]-5-methylpyrimidine-2,4-dione

Names & synonyms

Deoxyglucosylthymine5116-45-01-GPT1-(2'-Deoxy-beta-D-glucopyranosyl)thymine2,4(1H,3H)-Pyrimidinedione, 1-(2-deoxy-beta-D-arabino-hexopyranosyl)-5-methyl-RefChem:739361-(2'-deoxy-beta-D-glucopyranosyl)thymine, (D-arabino)-Deoxyglucopyranosylthymine1-[(2R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]-5-methylpyrimidine-2,4-dioneSCHEMBL10704051GPTNSC 402666

Database identifiers

CAS
5116-45-0
PubChem CID
101247
Nikkaji
J1.262.166C

Properties

Computed structural properties

XLogP
-1.8
Topological polar surface area
119 Ų
Hydrogen bond donors
4
Hydrogen bond acceptors
6
Rotatable bonds
2
Heavy atoms
19
Formal charge
0
Complexity
423

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Compound notes

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