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4-amino-1-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2-dihydropyrimidin-2-one

HCID 178609121
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Basic information

CAS
27921-78-4
Standard SMILES
Nc1ccn([C@H]2O[C@@H](CO)[C@H](O)[C@H]2O)c(=O)n1
InChIKey
UHDGCWIWMRVCDJ-JPCMASIJSA-N
Molecular formula
C9H13N3O5
Average molar mass
243.22 g/mol
Monoisotopic mass
243.08552052

Names & identifiers

Preferred name
4-amino-1-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2-dihydropyrimidin-2-one
IUPAC
4-amino-1-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one
English name
1-β-L-Arabinofuranosylcytosine
Molecular formula
C9H13N3O5
Molecular weight
243.22

Names & synonyms

27921-78-44-amino-1-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2-dihydropyrimidin-2-one.Beta.-L-Ara-CSCHEMBL42786331-.Beta.-L-ArabinofuranosylcytosineEBC-66077NCGC00482613-02Cytarabine Impurity 51; Azacitidine Impurity 20EN300-371586222(1H)-Pyrimidinone, 4-amino-1-Beta-L-arabinofuranosyl-4-amino-1-((2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)pyrimidin-2(1H)-one4-amino-1-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2-one
Show more names
Cytarabine Impurity 51Cytarabine Impurity 471-β-L-Arabinofuranosylcytosine1-β-L-ArabinofuranosylcytosineCytosine, 1-β-L-arabinofuranosyl- (8CI)2(1H)-Pyrimidinone, 4-amino-1-β-L-arabinofuranosyl-

Properties

Computed structural propertiesFilling in

XLogP
-2.1
Topological polar surface area
129 Ų
Hydrogen bond donors
4
Hydrogen bond acceptors
5
Rotatable bonds
2
Heavy atoms
17
Formal charge
0
Complexity
383

Physicochemical properties

Boiling point
545.7 · 545.7±60.0 °C(Predicted)
Density
1.89 · 1.89±0.1 g/cm3(Predicted)
pka
13.48 · 13.48±0.70(Predicted)

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Compound notes

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Database identifiers

CAS
27921-78-4
PubChem CID
6476646
Nikkaji
J671.265G