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(5'-(Tryptaminocarbonyl)-2'-deoxyribofuranosyl)thymine

HCID 196470
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Basic information

CAS
76500-11-3
Standard SMILES
Cc1cn([C@H]2C[C@H](O)[C@@H](C(=O)NCCc3c[nH]c4ccccc34)O2)c(=O)[nH]c1=O
InChIKey
DILDXMFFZQNCPJ-BBWFWOEESA-N
Molecular formula
C20H22N4O5
Average molar mass
398.4 g/mol
Monoisotopic mass
398.15901982

Overview

model cpd for study of interaction between indole and thymine rings; structure given in first source

Names & identifiers

Preferred name
(5'-(Tryptaminocarbonyl)-2'-deoxyribofuranosyl)thymine
IUPAC
(2S,3S,5R)-3-hydroxy-N-[2-(1H-indol-3-yl)ethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolane-2-carboxamide
English name
(5'-(tryptaminocarbonyl)-2'-deoxyribofuranosyl)thymine
Molecular formula
C20H22N4O5
Molecular weight
398.41

Names & synonyms

5-Tctd76500-11-3(5'-(Tryptaminocarbonyl)-2'-deoxyribofuranosyl)thyminebeta-D-erythro-Pentofuranuronamide, 1,2-dideoxy-1-(3,4-dihydro-5-methyl-2,4-dioxo-1(2H)-pyrimidinyl)-N-(2-(1H-indol-3-yl)ethyl)-RefChem:69577(2S,3S,5R)-3-hydroxy-N-[2-(1H-indol-3-yl)ethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolane-2-carboxamideβ-D-erythro-Pentofuranuronamide, 1,2-dideoxy-1-(3,4-dihydro-5-methyl-2,4-dioxo-1(2H)-pyrimidinyl)-N-[2-(1H-indol-3-yl)ethyl]-

Database identifiers

CAS
76500-11-3
PubChem CID
196470

Properties

Computed structural propertiesFilling in

XLogP
1.1
Topological polar surface area
124 Ų
Hydrogen bond donors
4
Hydrogen bond acceptors
5
Rotatable bonds
5
Heavy atoms
29
Formal charge
0
Complexity
711

Physicochemical properties

Density
1.433 · 1.433±0.06 g/cm3(Temp: 25 °C; Press: 760 Torr)(predicted)
pka
9.638 · 9.638±0.10(predicted)

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