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Benarthin

HCID 197330
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Basic information

CAS
143651-45-0
Standard SMILES
C[C@@H](O)[C@H](NC(=O)[C@H](CCCN=C(N)N)NC(=O)c1cccc(O)c1O)C(=O)O
InChIKey
RYFDAFYFFUVLNW-QRTLGDNMSA-N
Molecular formula
C17H25N5O7
Average molar mass
411.4 g/mol
Monoisotopic mass
411.17539815

Overview

Benarthin is a natural product found in Streptomyces species YM5-799 and Streptomyces xanthophaeus. It has a role as a metabolite.

Names & identifiers

Preferred name
Benarthin
IUPAC
(2S,3R)-2-[[(2S)-5-(diaminomethylideneamino)-2-[(2,3-dihydroxybenzoyl)amino]pentanoyl]amino]-3-hydroxybutanoic acid
English name
benarthin
Molecular formula
C17H25N5O7
Molecular weight
411.41

Names & synonyms

Benarthin143651-45-0(2,3-dihydroxybenzoyl)Arg-Thr(2,3-dihydroxybenzoyl)arginylthreonineL-Threonine, N-(N2-(2,3-dihydroxybenzoyl)-L-arginyl)-DTXSID30162483(2S,3R)-2-[[(2S)-5-(diaminomethylideneamino)-2-[(2,3-dihydroxybenzoyl)amino]pentanoyl]amino]-3-hydroxybutanoic acid(2S,3R)-2-(((2S)-5-(diaminomethylideneamino)-2-((2,3-dihydroxybenzoyl)amino)pentanoyl)amino)-3-hydroxybutanoic acidRefChem:116951DTXCID1084974(2S,3R)-2-((S)-2-(2,3-Dihydroxybenzamido)-5-guanidinopentanamido)-3-hydroxybutanoic acidMFCD01679777
Show more names
N2-(2,3-Dihydroxybenzoyl)-L-arginyl]-L-threonineL-Threonine, N2-(2,3-dihydroxybenzoyl)-L-arginyl-
N-(N(sup 2)-(2,3-Dihydroxybenzoyl)-L-arginyl)-L-threonineL-Threonine, N-(N(sup 2)-(2,3-dihydroxybenzoyl)-L-arginyl)-(2S,3R)-2-[(S)-2-(2,3-Dihydroxybenzamido)-5-guanidinopentanamido]-3-hydroxybutanoic AcidC17H25N5O7orb1701079CHEBI:688882,3-dihydroxybenzoyl-arginyl-threonineAKOS040747942

Properties

Computed structural properties

XLogP
-1
Topological polar surface area
221 Ų
Hydrogen bond donors
8
Hydrogen bond acceptors
8
Rotatable bonds
10
Heavy atoms
29
Formal charge
0
Complexity
611

Physicochemical properties

Density
1.55 · 1.55±0.1 g/cm3(Predicted)
pka
3.2 · 3.20±0.10(Predicted)
form
Solid
color
Off-white to gray
Symbol(GHS)
7 · GHS07
Signal word
Warning
Hazard statements
302 · H302-H315-H319-H335
Precautionary statements
261 · P261-P280-P301+P312-P302+P352-P305+P351+P338

Safety & regulation

Safety information is for reference only and does not replace the supplier’s Safety Data Sheet (SDS), applicable regulations, or professional assessment.

Safety data

Signal word
Warning
Symbol(GHS)
GHS07
Hazard statements
H302-H315-H319-H335
Precautionary statements
P261-P280-P301+P312-P302+P352-P305+P351+P338

Chemistry & industry

Applications

DescriptionBenarthin is an inhibitor of pyroglutamyl peptidase (PG-peptidase).

UsesBenarthin is a catechol-type siderophore isolated from the marine actinomycete Streptomyces YM5-799 that exhibits iron-chelating properties[1].

Additional notes

DefinitionChEBI: Benarthin is a peptide. It has a role as a metabolite.

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On this pageBasic informationOverviewNames & identifiersPropertiesSafety & regulationChemistry & industryRelated reactionsCompound notes

Database identifiers

CAS
143651-45-0
PubChem CID
197330
DTXSID
DTXSID30162483
ChEBI
CHEBI:68888
Nikkaji
J506.472D