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O-2-Deoxy-2-(methylamino)-alpha-L-glucopyranosyl-(1->2)-O-3-C-formyl-alpha-L-lyxofuranosyl-(1->4)-N1,N3-bis(aminoiminomethyl)-D-streptamine

HCID 23267
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Basic information

CAS
6835-00-3
Standard SMILES
CN[C@@H]1[C@H](O[C@H]2[C@H](O[C@H]3[C@H](O)[C@@H](O)[C@H](N=C(N)N)[C@@H](O)[C@@H]3N=C(N)N)O[C@@H](CO)[C@]2(O)C=O)O[C@@H](CO)[C@H](O)[C@H]1O
InChIKey
OFNXOACBUMGOPC-HZYVHMACSA-N
Molecular formula
C21H39N7O13
Average molar mass
597.6 g/mol
Monoisotopic mass
597.26058431

Overview

5'-hydroxystreptomycin is a streptomycin bearing an additional hydroxy substituent at the 5'-position (on the furanose ring). It is functionally related to a streptomycin.

Names & identifiers

Preferred name
O-2-Deoxy-2-(methylamino)-alpha-L-glucopyranosyl-(1->2)-O-3-C-formyl-alpha-L-lyxofuranosyl-(1->4)-N1,N3-bis(aminoiminomethyl)-D-streptamine
IUPAC
2-[(1R,2R,3S,4R,5R,6S)-3-(diaminomethylideneamino)-4-[(2R,3R,4R,5S)-3-[(2S,3S,4S,5R,6S)-4,5-dihydroxy-6-(hydroxymethyl)-3-(methylamino)oxan-2-yl]oxy-4-formyl-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-2,5,6-trihydroxycyclohexyl]guanidine
English name
N,N'-Bis(aminoiminomethyl)-4-O-[2-O-(2-deoxy-2-methylamino-α-L-glucopyranosyl)-3-C-formyl-α-L-lyxofuranosyl]-D-streptamine
Molecular formula
C21H39N7O13
Molecular weight
597.57

Names & synonyms

HydroxystreptomycinStreptomycin C6835-00-3QXR888I04O2-[(1R,2R,3S,4R,5R,6S)-3-(diaminomethylideneamino)-4-[(2R,3R,4R,5S)-3-[(2S,3S,4S,5R,6S)-4,5-dihydroxy-6-(hydroxymethyl)-3-(methylamino)oxan-2-yl]oxy-4-formyl-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-2,5,6-trihydroxycyclohexyl]guanidineDTXSID20218483D-Streptamine, O-2-deoxy-2-(methylamino)-alpha-L-glucopyranosyl-(1-2)-O-3-C-formyl-alpha-L-lyxofuranosyl-(1-4)-N,N'-bis(aminoiminomethyl)-oxystreptomycin2-((1R,2R,3S,4R,5R,6S)-3-(diaminomethylideneamino)-4-((2R,3R,4R,5S)-3-((2S,3S,4S,5R,6S)-4,5-dihydroxy-6-(hydroxymethyl)-3-(methylamino)oxan-2-yl)oxy-4-formyl-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl)oxy-2,5,6-trihydroxycyclohexyl)guanidineRefChem:928027DTXCID40140974O-2-Deoxy-2-(methylamino)-alpha-L-glucopyranosyl-(1->2)-O-3-C-formyl-alpha-L-lyxofuranosyl-(1->4)-N1,N3-bis(aminoiminomethyl)-D-streptamine
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Properties

Computed structural properties

XLogP
-8.5
Topological polar surface area
357 Ų
Hydrogen bond donors
13
Hydrogen bond acceptors
16
Rotatable bonds
10
Heavy atoms
41
Formal charge
0
Complexity
957

Experimental & physicochemical properties

DrugsPharmaceuticals -> Antibiotics

Physicochemical properties

Boiling point
918.7 · 918.7±75.0 °C(Predicted)
Density
2.04 · 2.04±0.1 g/cm3(Predicted)
pka
11.24 · 11.24±0.70(Predicted)
FDA UNII
888 I04O · QXR888I04O

Chemistry & industry

Applications

UsesHydroxystreptomycin is an active compound.

Additional notes

DefinitionChEBI: A streptomycin bearing an additional hydroxy substituent at the 5'-position (on the furanose ring)

Related reactions

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Compound notes

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NA-232-NI
Antibiotic D-212
Antibiotic NA-232-NI
N,N'-Bis(aminoiminomethyl)-4-O-[2-O-(2-deoxy-2-methylamino-α-L-glucopyranosyl)-3-C-formyl-α-L-lyxofuranosyl]-D-streptamine
4-O-[2-O-[2-(Methylamino)-2-deoxy-α-L-glucopyranosyl]-3-C-formyl-α-L-lyxofuranosyl]-N,N'-bis[amino(imino)methyl]-D-streptamine
D-Streptamine, O-2-deoxy-2-(methylamino)-α-L-glucopyranosyl-(1→2)-O-3-C-formyl-α-L-lyxofuranosyl-(1→4)-N1,N3-bis(aminoiminomethyl)-
5'-Hydroxystreptomycin1,1'-[(1R,2R,3S,4R,5R,6S)-4-({2-O-[2-deoxy-2-(methylamino)-alpha-L-glucopyranosyl]-3-C-formyl-alpha-L-lyxofuranosyl}oxy)-2,5,6-trihydroxycyclohexane-1,3-diyl]diguanidineUNII-QXR888I04ORETICULIN (ANTIBIOTIC)HYDROXYSTREPTOMYCIN [MI]CHEBI:24750D-Streptamine, O-2-deoxy-2-(methylamino)-alpha-L-glucopyranosyl-(1-2)-O-3-C-formyl-alpha-L-lyxofuranosyl-(1-4)-N,N'-diamidino-NS00011546

Database identifiers

CAS
6835-00-3
PubChem CID
23267
DTXSID
DTXSID20218483
ChEBI
CHEBI:24750
UNII
QXR888I04O