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1-Methyladenosine

HCID 27476
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Basic information

CAS
15763-06-1
Standard SMILES
Cn1cnc2c(ncn2[C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c1=N
InChIKey
GFYLSDSUCHVORB-IOSLPCCCSA-N
Molecular formula
C11H15N5O4
Average molar mass
281.27 g/mol
Monoisotopic mass
281.11240398

Overview

1-methyladenosine is a methyladenosine carrying a methyl substituent at position 1. It has a role as a human metabolite. It is functionally related to an adenosine.

Names & identifiers

Preferred name
1-Methyladenosine
IUPAC
(2R,3S,4R,5R)-2-(hydroxymethyl)-5-(6-imino-1-methylpurin-9-yl)oxolane-3,4-diol
English name
1-Methyladenosine
Molecular formula
C11H15N5O4
Molecular weight
281.27

Names & synonyms

1-Methyladenosine15763-06-1N(1)-methyladenosineCHEBI:16020DTXSID30864632(2R,3S,4R,5R)-2-(hydroxymethyl)-5-(6-imino-1-methyl-6,9-dihydro-1H-purin-9-yl)oxolane-3,4-diolRefChem:907696DTXCID201334155Adenosine, 1-methyl-N1-Methyladenosine(2R,3S,4R,5R)-2-(hydroxymethyl)-5-(6-imino-1-methylpurin-9-yl)oxolane-3,4-diolAdenosine, N,6-didehydro-1,6-dihydro-1-methyl-
Show more names
N1-Me-rAN1-Me-Adenosine1-methyladenosine free baseRNA-modified nucleoside m1A1-Methyladenosine, 10 mM in DMSON,6-Didehydro-1,6-dihydro-1-methyladenosine(2R,3R,4R,5R)-2-(hydroxymethyl)-5-(6-imino-1-methyl-purin-9-yl)oxolane-3,4-diolinhibit,1-Methyladenosine,1 Methyladenosine,Endogenous Metabolite,Inhibitor,1Methyladenosine
AKOS030241121NCGC00163305-01AC-32347PD018070HY-113081H10051(2R,3S,4R,5R)-2-(hydroxymethyl)-5-(6-imino-1-methyl-purin-9-yl)tetrahydrofuran-3,4-diolAdenosine, N,6-didehydro-1,9-dihydro-1-methyl-

Properties

Computed structural properties

XLogP
-1
Topological polar surface area
127 Ų
Hydrogen bond donors
4
Hydrogen bond acceptors
7
Rotatable bonds
2
Heavy atoms
20
Formal charge
0
Complexity
433

Experimental & physicochemical properties

Physical DescriptionSolid
Collision Cross Section · 3 items

162.7 Ų [M-H]- [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]

159.21 Ų [M-H]- [CCS Type: DT; Method: single field calibrated with Agilent tune mix (Agilent)]

164.9 Ų [M+H]+

Physicochemical properties

Melting point
217 °C · >217°C (dec.)
Boiling point
655.4 · 655.4±65.0 °C(Predicted)
Density
1.88 · 1.88±0.1 g/cm3(Predicted)
storage temp.
20 °C · −20°C
solubility
DMSO (Slightly), Water (Slightly, Sonicated)
form
Solid
pka
13.24 · 13.24±0.70(Predicted)
color
White to Off-White
PH
8.8 · 8.8
λmax
258 · 258 (pH 2);258 (pH 7);259,260~265 (pH 13)

Safety & regulation

Safety information is for reference only and does not replace the supplier’s Safety Data Sheet (SDS), applicable regulations, or professional assessment.

Safety data

wgk
WGK 3
hs_code
29389090
safety_code
24/25
Storage Class
11 - Combustible Solids

Chemistry & industry

Pharmacology

Tissue LocationsPlacenta
Cellular LocationsCytoplasm
Applications · 2 items

Description1-Methyladenosine is a modified nucleoside generated by the processing of tRNA by methyltransferases. The urinary excretion of 1-methyladenosine is elevated in several forms of cancer, supporting its use as a biomarker in early detection. It can also be monitored in serum. Urinary levels of 1-methyladenosine also increase during active rheumatoid arthritis.

Uses1-Methyl Adenosine is a modified adenosine molecule created through the processing of tRNA by methyltransferases. The presence seen to be elevated in the urinary excretion of cancer patients. Thus it may be an early diagnosis biomarker.

Additional notes

DefinitionChEBI: A methyladenosine carrying a methyl substituent at position 1.

Related reactions

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Compound notes

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Database identifiers

CAS
15763-06-1
PubChem CID
27476
DTXSID
DTXSID30864632
ChEMBL
CHEMBL1866485
ChEBI
CHEBI:16020
Nikkaji
J130.848C
Stability
Hygroscopic, Light Sensitive
InChI
InChI=1/C11H15N5O4/c1-15-3-14-10-6(9(15)12)13-4-16(10)11-8(19)7(18)5(2-17)20-11/h3-5,7-8,11-12,17-19H,2H2,1H3/t5-,7-,8-,11-/s3
InChIKey
GFYLSDSUCHVORB-ABFAXUGDNA-N
SMILES
N1(C=NC2C(=N)N(C)C=NC1=2)[C@H]1[C@H](O)[C@H](O)[C@@H](CO)O1 |&1:11,12,14,16,r|
UNSPSC Code
12352123 · 12352123
NACRES
79 · NA.79
Safety Statements
24 · 24/25
WGK Germany
3 · WGK 3
HS Code
29389090 · 29389090
Storage Class
11 · 11 - Combustible Solids