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3'-Azido-3'-deoxy-4-thiothymidine

HCID 3000254
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Basic informationOverviewNames & identifiersPropertiesRelated reactionsCompound notes
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Basic information

CAS
108441-45-8
Standard SMILES
Cc1cn([C@H]2C[C@H](N=[N+]=[N-])[C@@H](CO)O2)c(=O)[nH]c1=S
InChIKey
LQGXMSIIZGFDND-XLPZGREQSA-N
Molecular formula
C10H13N5O3S
Average molar mass
283.31 g/mol
Monoisotopic mass
283.07391047

Overview

shows anti-HIV activity in ATH8 cells; RN and structure given in first source

Names & identifiers

Preferred name
3'-Azido-3'-deoxy-4-thiothymidine
IUPAC
1-[(2R,4S,5S)-4-azido-5-(hydroxymethyl)oxolan-2-yl]-5-methyl-4-sulfanylidenepyrimidin-2-one
English name
3'-azido-3'-deoxy-4-thiothymidine
Molecular formula
C10H13N5O3S
Molecular weight
283.31

Names & synonyms

3'-Azido-3'-deoxy-4-thiothymidine108441-45-8N3ddThdS3DTXSID00148552RefChem:90316DTXCID0071043CHEMBL1790742N3ddThdSThymidine, 3'-azido-3'-deoxy-4-thio-LQGXMSIIZGFDND-XLPZGREQSA-NBDBM503679201-(3-Azido-2,3-dideoxy-beta-D-erythro-pentofuranosyl)-5-methyl-4-sulfanylidene-3,4-dihydropyrimidin-2(1H)-one
Show more names
3,4-Dihydro-5-methyl-1-[(5β-hydroxymethyl-4α-azidotetrahydrofuran)-2β-yl]-4-thioxopyrimidin-2(1H)-one
1-[(2R,4S,5S)-4-azido-5-(hydroxymethyl)tetrahydrofuran-2-yl]-5-methyl-4-thioxo-pyrimidin-2-one

Database identifiers

CAS
108441-45-8
PubChem CID
3000254
DTXSID
DTXSID00148552
ChEMBL
CHEMBL1790742
Nikkaji
J264.459B

Properties

Computed structural propertiesFilling in

XLogP
0.6
Topological polar surface area
108 Ų
Hydrogen bond donors
2
Hydrogen bond acceptors
6
Rotatable bonds
3
Heavy atoms
19
Formal charge
0
Complexity
488

Experimental & physicochemical properties

LogP1.07

Physicochemical properties

Melting point
82 · 82-85 °C(Solvent: Ethanol)
pka
4.873 · 4.873±0.40(predicted)

Related reactions

3 records
New reaction record
HRID 973789 reaction equation
HRID 973789As productuspto-grants-1991_11
HRID 973797 reaction equation
HRID 973797As reactantuspto-grants-1991_11
HRID 973798 reaction equation
HRID 973798As reactantuspto-grants-1991_11

Compound notes

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