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Poly dA-dT

HCID 33656
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Basic informationOverviewNames & identifiersPropertiesRelated reactionsCompound notes
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Basic information

CAS
26966-61-0
Standard SMILES
Cc1cn([C@H]2C[C@H](O)[C@@H](COP(=O)(O)O[C@H]3C[C@H](n4cnc5c(N)ncnc54)O[C@@H]3COP(=O)(O)O)O2)c(=O)[nH]c1=O
InChIKey
YRITVODHCMDVSY-BBZRCZKMSA-N
Molecular formula
C20H27N7O13P2
Average molar mass
635.4 g/mol
Monoisotopic mass
635.11420794

Overview

Polydeoxyribonucleotides made up of deoxyadenine nucleotides and thymine nucleotides. Present in DNA preparations isolated from crab species. Synthetic preparations have been used extensively in the study of DNA.

Names & identifiers

Preferred name
Poly dA-dT
IUPAC
[(2R,3S,5R)-5-(6-aminopurin-9-yl)-2-(phosphonooxymethyl)oxolan-3-yl] [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methyl hydrogen phosphate
English name
Poly dA-dT
Molecular formula
C20H27N7O13P2
Molecular weight
635.415002

Names & synonyms

26966-61-0DTXSID60181465DTXCID70103956RefChem:175052SCHEMBL29362454{(2R,3S,5R)-5-(6-Amino-9H-purin-9-yl)-3-[(hydroxy{[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)oxolan-2-yl]methoxy}phosphoryl)oxy]oxolan-2-yl}methyl dihydrogen phosphate

Database identifiers

CAS
26966-61-0
PubChem CID
33656
DTXSID
DTXSID60181465
Nikkaji
J2.258.742K

Properties

Computed structural properties

XLogP
-4.2
Topological polar surface area
280 Ų
Hydrogen bond donors
6
Hydrogen bond acceptors
17
Rotatable bonds
10
Heavy atoms
42
Formal charge
0
Complexity
1,180

Related reactions

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Compound notes

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