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Cinerubin B hcl

HCID 409071
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Basic information

CAS
35906-51-5
Standard SMILES
CCC1(O)CC(OC2CC(N(C)C)C(OC3CC4OC5CC(=O)C(C)OC5OC4C(C)O3)C(C)O2)c2c(cc3c(c2O)C(=O)c2c(O)ccc(O)c2C3=O)C1C(=O)OC
InChIKey
ZBDDFHXUDIPRSM-UHFFFAOYSA-N
Molecular formula
C42H51NO16
Average molar mass
825.8 g/mol
Monoisotopic mass
825.32078454

Overview

See also: Cinerubin B (annotation moved to).

Names & identifiers

Preferred name
Cinerubin B hcl
IUPAC
methyl 4-[4-(dimethylamino)-5-[(5,14-dimethyl-6-oxo-2,4,9,13-tetraoxatricyclo[8.4.0.03,8]tetradecan-12-yl)oxy]-6-methyloxan-2-yl]oxy-2-ethyl-2,5,7,10-tetrahydroxy-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylate
English name
cinerubine B
Molecular formula
C42H51NO16
Molecular weight
825.85

Names & synonyms

CINERUBIN B HCLNSC 18335NSC18335NSC62490NSC2430231-Naphthacenecarboxylic acid,3''-anhydro]-O-3,6-dideoxy-.alpha.-L-erythro-hexopyranos-4-ulos-1-yl-(1.fwdarw.4)-O-2,6-dideoxy-.alpha.-L-lyxo-hexopyranosyl-(1.fwdarw.4)-2,3,6-trideoxy-3-(dimethylamino)-.alpha.-L-lyxo-hexopyranosyl]oxy]-2-ethyl-1,2,3,4,6,11-hexahydro-2,5,7,10-tetrahydroxy-6,11-dioxo-, methyl ester,[1R-(1.alpha.,2.beta.,4.beta.)]-1-Naphthacenecarboxylic acid,3''-anhydro]-O-3,6-dideoxy-.alpha.-L-erythro-hexopyranos-4-uloslyl-(1.fwdarw.4)-O-2,6-dideoxy-.alpha.-L-lyxo-hexopyranosyl-(1.fwdarw.4)-2,3,6-trideoxy-3-(dimethylamino)-.alpha.-L-lyxo-hexopyranosyl]oxy]-2-ethyl-1,2,3,4,6,11-hexahydro-2,5,7,10-tetrahydroxy-6,11-dioxo-, methyl ester,[1R-(1.alpha.,2.beta.,4.beta.)]-Cinerubin B hydrochlorideCinerubine B, hydrochlorideNeuro_000116CHEMBL1975340SCHEMBL31237197
Show more names
Cinerubin Bcinerubine B1-Naphthacenecarboxylic acid, 4-[[[2''',3''-anhydro]-O-3,6-dideoxy-α-L-erythro-hexopyranos-4-ulos-1-yl-(1→4)-O-2,6-dideoxy-α-L-lyxo-hexopyranosyl-(1→4)-2,3,6-trideoxy-3-(dimethylamino)-α-L-lyxo-hexopyranosyl]oxy]-2-ethyl-1,2,3,4,6,11-hexahydro-2,5,7,10-tetrahydroxy-6,11-dioxo-, methyl ester, (1R,2R,...

Properties

Computed structural properties

XLogP
4
Topological polar surface area
226 Ų
Hydrogen bond donors
4
Hydrogen bond acceptors
17
Rotatable bonds
8
Heavy atoms
59
Formal charge
0
Complexity
1,610

Physicochemical properties

Melting point
173 °C · 173°C
Boiling point
762.31 °C · 762.31°C (rough estimate)
Density
1.2494 · 1.2494 (rough estimate)
refractive index
1.622 · 1.6220 (estimate)
solubility
Dichloromethane: solubleDMSO: solubleEthanol: solubleMethanol: soluble
pka
6.2 · 6.20±0.70(Predicted)

Chemistry & industry

Applications

UsesCinerubine B is an antimitotic antibiotic from Streptomyces.

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Compound notes

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On this pageBasic informationOverviewNames & identifiersPropertiesChemistry & industryRelated reactionsCompound notes
NSC-18335NSC-62490BS-1316CCG-102449NSC-243023Cinerubin-B; Ryemycin-B1; 1-Hydroxyaclacinomycin B; Tavromycetin-III; Tauromycetin-III;1-Naphthacenecarboxylic acid,3''-anhydro)-O-3,6-dideoxy-.alpha.-L-erythro-hexopyranos-4-ulos-1-yl-(1.fwdarw.4)-O-2,6-dideoxy-.alpha.-L-lyxo-hexopyranosyl-(1.fwdarw.4)-2,3,6-trideoxy-3-(dimethylamino)-.alpha.-L-lyxo-hexopyranosyl]oxy]-2-ethyl-1,2,3,4,6,11-hexahydro-2,5,7,10-tetrahydroxy-6,11-dioxo-, methyl ester, [1R-(1.alpha.,2.beta.,4.beta.)]-1-Naphthacenecarboxylic acid,3''-anhydro)-O-3,6-dideoxy-.alpha.-L-erythro-hexopyranos-4-uloslyl-(1.fwdarw.4)-O-2,6-dideoxy-.alpha.-L-lyxo-hexopyranosyl-(1.fwdarw.4)-2,3,6-trideoxy-3-(dimethylamino)-.alpha.-L-lyxo-hexopyranosyl]oxy]-2-ethyl-1,2,3,4,6,11-hexahydro-2,5,7,10-tetrahydroxy-6,11-dioxo-, methyl ester, [1R-(1.alpha.,2.beta.,4.beta.)]-

Database identifiers

CAS
35906-51-5
PubChem CID
409071
ChEMBL
CHEMBL1975340