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Pandamine

HCID 442576
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Basic information

CAS
10233-81-5
Standard SMILES
CC[C@H](C)[C@@H](C(=O)N[C@@H]1C(=O)N[C@@H](Cc2ccccc2)C(=O)NCC(O)c2ccc(cc2)O[C@H]1C(C)C)N(C)C
InChIKey
STKZKAJIJHJDCQ-CVCFRWPJSA-N
Molecular formula
C31H44N4O5
Average molar mass
552.7 g/mol
Monoisotopic mass
552.33117052

Overview

Pandamine is a cyclic peptide.

Names & identifiers

Preferred name
Pandamine
IUPAC
(2S,3S)-N-[(3S,4S,7S)-7-benzyl-11-hydroxy-5,8-dioxo-3-propan-2-yl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-trien-4-yl]-2-(dimethylamino)-3-methylpentanamide
English name
2-(Dimethylamino)-N-[11-hydroxy-3-isopropyl-5,8-dioxo-7-benzyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-12,14(1),15-trien-4-yl]-3-methylpentanamide
Molecular formula
C31H44N4O5
Molecular weight
552.71

Names & synonyms

Pandamine10233-81-5DTXSID70331878(2S,3S)-N-[(6S,9S,10S)-6-benzyl-2-hydroxy-10-isopropyl-5,8-dioxo-11-oxa-4,7-diazabicyclo[10.2.2]hexadeca-1(14),12,15-trien-9-yl]-2-(dimethylamino)-3-methyl-pentanamide(2S,3S)-N-((3S,4S,7S,11R)-7-Benzyl-5,8,11-trihydroxy-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo(10.2.2)hexadeca-1(14),5,8,12,15-pentaen-4-yl)-2-(dimethylamino)-3-methylpentanimidate(2S,3S)-N-((6S,9S,10S)-6-benzyl-2-hydroxy-10-isopropyl-5,8-dioxo-11-oxa-4,7-diazabicyclo(10.2.2)hexadeca-1(14),12,15-trien-9-yl)-2-(dimethylamino)-3-methyl-pentanamide(2S,3S)-N-[(3S,4S,7S,11R)-7-Benzyl-5,8,11-trihydroxy-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]-2-(dimethylamino)-3-methylpentanimidateRefChem:169847DTXCID70282972C10012(2S,3S)-N-[(3S,4S,7S)-7-benzyl-11-hydroxy-5,8-dioxo-3-propan-2-yl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-trien-4-yl]-2-(dimethylamino)-3-methylpentanamide2-(Dimethylamino)-N-[11-hydroxy-3-isopropyl-5,8-dioxo-7-benzyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-12,14(1),15-trien-4-yl]-3-methylpentanamide

Properties

Computed structural properties

XLogP
4
Topological polar surface area
120 Ų
Hydrogen bond donors
4
Hydrogen bond acceptors
6
Rotatable bonds
8
Heavy atoms
40
Formal charge
0
Complexity
823

Physicochemical properties

Melting point
256 °C · 256°C
Boiling point
815.642 · 815.642±65.00 °C(Press: 760.00 Torr)(predicted)
Density
1.185 · 1.185±0.10 g/cm3(Temp: 25 °C; Press: 760 Torr)(predicted)
pka
13.258 · 13.258±0.70(predicted)

Chemistry & industry

Applications · 2 items

DescriptionAn alkaloid of the peptide class, this base if found in Panda oleosa Pierre. It is best crystallized from AcOEt when it yields clusters of colourless crystals. It has [α]D - 103° (c 0.5, CHCI3) and gives a laevorotatory hydrochloride, m.p. 235°C (dec.); [α]D - 77° (c 1.0, MeOH). The presence of a hydroxyl group is shown by the formation of the O-acetate, m.p. 30S-7°C; [α]D - 98° (c 0.5, pyridine), giving a hydrochloride, m.p. 280°C (dec.); [α]D - 89° (c 1.0, MeOH). Three of the nitrogen atoms are present as amide groups, the fourth being a dimethylamino group.

UsesPandamine is a natural alkaloid that can be extracted from Panda oleosa[1].

Additional notes

DefinitionChEBI: Pandamine is a cyclic peptide.

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Compound notes

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Show more names
AC1L9D2WCHEBI:7909SCHEMBL29435997Q27107613N-[(3S,4S,7S)-7-Benzyl-11-hydroxy-5,8-dioxo-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-trien-4-yl]-N~2~,N~2~-dimethyl-L-isoleucinamide

Database identifiers

CAS
10233-81-5
PubChem CID
442576
DTXSID
DTXSID70331878
ChEBI
CHEBI:7909