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2,4(1H,3H)-Pyrimidinedione, 1-(3-deoxy-3-(hydroxymethyl)-beta-D-arabinofuranosyl)-5-methyl-

HCID 452409
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Basic information

CAS
130351-55-2
Standard SMILES
Cc1cn([C@@H]2O[C@H](CO)[C@@H](CO)[C@@H]2O)c(=O)[nH]c1=O
InChIKey
SAQLIIXINWYWJX-BDNRQGISSA-N
Molecular formula
C11H16N2O6
Average molar mass
272.25 g/mol
Monoisotopic mass
272.10083623

Names & identifiers

Preferred name
2,4(1H,3H)-Pyrimidinedione, 1-(3-deoxy-3-(hydroxymethyl)-beta-D-arabinofuranosyl)-5-methyl-
IUPAC
1-[(2R,3S,4S,5S)-3-hydroxy-4,5-bis(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione

Names & synonyms

3'-Hydroxymethyl Ara-T130351-55-22,4(1H,3H)-Pyrimidinedione, 1-(3-deoxy-3-(hydroxymethyl)-beta-D-arabinofuranosyl)-5-methyl-3'-Deoxy-3'-C-(hydroxymethyl)-beta-D-arabino-pentofuranosyl thymineCHEMBL2112591DTXSID501564603'-Deoxy-3'-C-(hydroxymethyl)-.beta.-D-arabino-pentofuranosyl thymine1-[3-Deoxy-3-(hydroxymethyl)-beta-D-arabinofuranosyl]-5-methylpyrimidine-2,4(1H,3H)-dione1-[(2R,3S,4S,5S)-3-hydroxy-4,5-bis(hydroxymethyl)tetrahydrofuran-2-yl]-5-methyl-pyrimidine-2,4-dione2,4(1H,3H)-Pyrimidinedione, 1-[3-deoxy-3-(hydroxymethyl)-.beta.-D-arabinofuranosyl]-5-methyl-

Database identifiers

CAS
130351-55-2
PubChem CID
452409
DTXSID
DTXSID50156460
ChEMBL
CHEMBL2112591
Nikkaji
J343.690J

Properties

Computed structural properties

XLogP
-1.7
Topological polar surface area
119 Ų
Hydrogen bond donors
4
Hydrogen bond acceptors
6
Rotatable bonds
3
Heavy atoms
19
Formal charge
0
Complexity
423

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