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Sitafloxacin

HCID 461399
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Basic information

CAS
127254-12-0
Standard SMILES
N[C@@H]1CN(c2c(F)cc3c(=O)c(C(=O)O)cn([C@@H]4C[C@@H]4F)c3c2Cl)CC12CC2
InChIKey
PNUZDKCDAWUEGK-CYZMBNFOSA-N
Molecular formula
C19H18ClF2N3O3
Average molar mass
409.8 g/mol
Monoisotopic mass
409.1004755

Overview

Sitafloxacin is a member of quinolines, a quinolone antibiotic and a fluoroquinolone antibiotic.

Names & identifiers

Preferred name
Sitafloxacin
IUPAC
7-[(7S)-7-amino-5-azaspiro[2.4]heptan-5-yl]-8-chloro-6-fluoro-1-[(1R,2S)-2-fluorocyclopropyl]-4-oxoquinoline-3-carboxylic acid
English name
Sitafloxacin
Molecular formula
C19H18ClF2N3O3
Molecular weight
409.81

Names & synonyms

Sitafloxacin127254-12-0Sitafloxacin hydrateGracevit163253-35-8Sitafloxacin SesquihydrateDU-6859aDU 68597-[(7S)-7-amino-5-azaspiro[2.4]heptan-5-yl]-8-chloro-6-fluoro-1-[(1R,2S)-2-fluorocyclopropyl]-4-oxoquinoline-3-carboxylic acidsitafloxacinesitafloxacino7-((7S)-Amino-5-azaspiro(2,4)heptan-5-yl)-8-chloro-6-fluoro-1-((1R,2R)-cis-2-fluoro-1-cyclopropyl)-1,4-dihydro-4-oxoquinolone-3-carboxylic acid
Show more names
spifloxacinSitfloxacfnSitafloxacfnThe west wasSitafloxacin-d4D4-SitafloxacinSitafloxacin anhydrousSitafloxacin (DU-6859a)Sitafloxacin Impurity 28Sitafloxacin ABCDEFGHJKL
7-(7-Amino-5-azaspiro(2.4)heptan-5-yl)-8-chloro-6-fluoro-1-(2-fluorocyclopropyl)-1,4-dihydro-4-oxo-3-quinolinecarboxylic acid sesquihydrate3-Quinolinecarboxylic acid, 7-(7-amino-5-azaspiro(2.4)hept-5-yl)-8-chloro-6-fluoro-1-(2-fluorocyclopropyl)-1,4-dihydro-4-oxo-, (1R-(1alpha(S*),2alpha))-DTXSID5048847sitafloxacinum7-((7S)-7-amino-5-azaspiro(2.4)heptan-5-yl)-8-chloro-6-fluoro-1-((1R,2S)-2-fluorocyclopropyl)-4-oxoquinoline-3-carboxylic acidRefChem:183248J01MA21DTXCID001508649

Properties

Computed structural properties

XLogP
0.7
Topological polar surface area
86.9 Ų
Hydrogen bond donors
2
Hydrogen bond acceptors
8
Rotatable bonds
3
Heavy atoms
28
Formal charge
0
Complexity
761

Experimental & physicochemical properties

Drugs · 2 items

Pharmaceuticals -> Listed in ZINC15

Pharmaceuticals -> Anti infectives for systemic use -> Antibacterials for systemic use

Physicochemical properties

Boiling point
629.2 · 629.2±55.0 °C(Predicted)
Density
1.63 · 1.63±0.1 g/cm3(Predicted)
storage temp.
-20 °C · Store at -20°C
solubility
DMF: slightly soluble; DMSO: slightly soluble; Methanol: slightly soluble
form
A crystalline solid
pka
6.39 · 6.39±0.50(Predicted)
Appearance
white solid
InChIKey
PNUZDKCDAWUEGK-CYZMBNFOSA-N
SMILES
N1([C@@H]2C[C@@H]2F)C2=C(C=C(F)C(N3C[C@@H](N)C4(CC4)C3)=C2Cl)C(=O)C(C(O)=O)=C1
CAS DataBase Reference
127254 · 127254-12-0(CAS DataBase Reference)
FDA UNII
3 GJC60U4Q8 · 3GJC60U4Q8

Safety & regulation

Safety information is for reference only and does not replace the supplier’s Safety Data Sheet (SDS), applicable regulations, or professional assessment.

Safety data

Signal word
Warning
Symbol(GHS)
GHS07
Hazard statements
H302-H315-H319-H335
Precautionary statements
P261-P264-P270-P271-P280-P301+P312-P302+P352-P304+P340-P305+P351+P338-P330-P332+P313-P337+P313-P362-P403+P233-P405-P501

Chemistry & industry

Pharmacology

ATC Code · 2 items

J - Antiinfectives for systemic use

QJ - Antiinfectives for systemic use

MeSH Pharmacological Classification · 2 items

Substances that inhibit the growth or reproduction of BACTERIA.

Compounds that inhibit the activity of DNA TOPOISOMERASE II. Included in this category are a variety of ANTINEOPLASTIC AGENTS which target the eukaryotic form of topoisomerase II and ANTIBACTERIAL AGENTS which target the prokaryotic form of topoisomerase II.

Applications · 3 items

DescriptionSitafloxacin (Trade name: Gracevit in Japan) belongs to a new generation, broad-spectrum oral fluoroquinolone antibiotics. It is highly active against various kinds of gram-negative, gram-positive and anaerobic clinical isolates, even including strains that are resistant to other kinds of fluoroquinolone antibiotics. It has been listed in Japan for the treatment of respiratory and urinary tract infections. It also shows potential for the treatment of Buruli ulcer. Its mechanism of action is through inhibiting the Topoisomerase II ligase domain of bacteria, causing DNA fragmentation to inhibit the DNA synthesis of bacteria.

DescriptionSitafloxacin hydrate is the newest member (fourth generation) of the fluoroquinolone family of antibiotics that exhibits broad spectrum activity against many Gram-positive, Gramnegative, and anaerobic clinical isolates, including strains resistant to other fluoroquinolones. Since the launch of the first fluoroquinolone norfloxacin (patented in 1978), 20 other versions have made it to market with ciprofloxacin and levofloxacin experiencing the most prevalent usage. The mechanism of action involves inhibition of bacterial type II topoisomerases, both DNA gyrase and topoisomerase IV. By inhibiting these enzymes and preventing DNA supercoiling, cell division is disrupted leading to cell death. In Gram-negative bacteria, the primary target appears to be gyrase, whereas topoisomerase IV is involved in Gram-positive bacteria. Dual inhibition is attractive for widespread activity and avoidance of resistance as both encoding genes would have to acquire mutations.

Antibacterial (DNA-gyrase inhibitor).

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Compound notes

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Database identifiers

CAS
127254-12-0、163253-35-8
PubChem CID
461399
ChEMBL
CHEMBL108821、CHEMBL3989504
ChEBI
CHEBI:4304
UNII
3GJC60U4Q8
Nikkaji
J482.678G
ATC code
1 MA21 · J01MA21
Symbol(GHS)
7 · GHS07
Signal word
Warning
Hazard statements
302 · H302-H315-H319-H335
Precautionary statements
261 · P261-P264-P270-P271-P280-P301+P312-P302+P352-P304+P340-P305+P351+P338-P330-P332+P313-P337+P313-P362-P403+P233-P405-P501
Uses

Additional notes

DefinitionChEBI: Sitafloxacin is a member of quinolines, a quinolone antibiotic and a fluoroquinolone antibiotic.