Uridine Diphosphate

HCID 6031
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Basic information

CAS
58-98-0
Standard SMILES
O=c1ccn([C@@H]2O[C@H](COP(=O)(O)OP(=O)(O)O)[C@@H](O)[C@H]2O)c(=O)[nH]1
InChIKey
XCCTYIAWTASOJW-XVFCMESISA-N
Molecular formula
C9H14N2O12P2
Average molar mass
404.16 g/mol
Monoisotopic mass
404.00219788

Names & identifiers

Preferred name
Uridine Diphosphate
IUPAC
[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphono hydrogen phosphate
English name
UDP
Molecular formula
C9H14N2O12P2
Molecular weight
404.16

Names & synonyms

58-98-0URIDINE DIPHOSPHATEuridine-5'-diphosphateUridine PyrophosphateURIDINE_DIPHOSPHATE5G0F599A1YDTXSID001018933[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphono hydrogen phosphateDiphosphate, UridinePyrophosphate, Uridine((2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl)methyl phosphono hydrogen phosphateRefChem:901480
Show more names
uridinediphosphateUDP/Uridine DiphosphateUridine 5'-Diphosphate15'-URIDYLATE DIPHOSPHATE5′-UDP/Uridine 5′-Diphosphate5'-uridylate diphosphate (UDP)Uridine5'-Diphosphate Ester(UDP)uridine 5'-(trihydrogen pyrophosphate)
DTXCID501476946Uridine 5'-diphosphateUridine 5'-(trihydrogen diphosphate)UDP5'-UDPUridine 5'-pyrophosphate((2R,3S,4R,5R)-5-(2,4-Dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl trihydrogen diphosphateUridine 5'-pyrophosphoric acid

Database identifiers

CAS
58-98-0
PubChem CID
6031
ChEMBL
CHEMBL130266
ChEBI
CHEBI:17659
UNII
5G0F599A1Y
EC Number
200-409-6
Nikkaji
J4.595K

Properties

Computed structural properties

XLogP
-4.7
Topological polar surface area
212 Ų
Hydrogen bond donors
6
Hydrogen bond acceptors
12
Rotatable bonds
6
Heavy atoms
25

Experimental & physicochemical properties

Physical DescriptionSolid
Collision Cross Section · 4 items

174 Ų [M+H]+ [CCS Type: TW; Method: calibrated with polyalanine]

176.5 Ų [M+H]+ [CCS Type: DT; Method: single field calibrated with Agilent tune mix (Agilent)]

181.7 Ų [M+Na]+ [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]；178.6 Ų [M+Na-2H]- [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]；172.9 Ų [M-H]- [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]；178.5 Ų [M+Na]+ [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]；176.9 Ų [M+H]+ [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]

178.1 Ų [M+Na]+；176.5 Ų [M+H]+；178.7 Ų [M-2H+Na]-；172.9 Ų [M-H]-；181.7 Ų [M+Na]+

Physicochemical properties

storage temp.
-20 °C · Inert atmosphere,Store in freezer, under -20°C
Density
2.002 · 2.002±0.06 g/cm3(Predicted)
pka
1.04 · 1.04±0.50(Predicted)
FDA UNII
5 G0F599A1Y · 5G0F599A1Y
Symbol(GHS)
7 · GHS07
Signal word
Warning

Safety & regulation

Safety data

Signal word
Warning
Symbol(GHS)
GHS07
Hazard statements
H302-H315-H319-H335
Precautionary statements
P261-P305+P351+P338

Chemistry & industry

Pharmacology

Tissue LocationsPlacenta；Prostate；Thyroid Gland
Cellular LocationsCytoplasm；Endoplasmic reticulum；Extracellular；Golgi apparatus；Lysosome；Mitochondria；Nucleus
Metabolite Pathways · 1 item

17-Beta Hydroxysteroid Dehydrogenase III Deficiency；Acetaminophen Metabolism Pathway；Acute Intermittent Porphyria；Amino Sugar Metabolism；Androgen and Estrogen Metabolism；Androstenedione Metabolism；Aromatase deficiency；Artemether Metabolism Pathway；Beta Ureidopropionase Deficiency；Celecoxib Action Pathway；Total 63 pathways, visit the HMDB page for details

Applications

UsesUridine 5’-Diphosphate-13C,15N2 is an isotopic analog of Uridine 5’-Diphosphate (U829920), a phosphorylated derivative of the nucleoside Uridine. It is further phosphorylated by nucleoside diphosphokinase to form the triphosphate analogue.

Upstream & downstream products

Downstream products

Suppliers48 total

陕西缔都医药有限责任公司029-81124775 17791530730 · [email protected]
湖北永阔科技有限公司027-59223108 15972152991 · [email protected]
南通飞宇生物科技有限公司0513-68819626 15152877458 · [email protected]
湖北万得化工有限公司15377098680 15377098680 · [email protected]
湖北威德利化学试剂有限公司181-6332-1995 18062128043 · [email protected]

Additional notes

DefinitionChEBI: UDP is a uridine 5'-phosphate and a pyrimidine ribonucleoside 5'-diphosphate. It has a role as an Escherichia coli metabolite and a mouse metabolite. It is a conjugate acid of an UDP(3-).

Related reactions

11 records
New reaction record

Compound notes

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