Deoxyuridine Triphosphate

HCID 65070CAS 102814-08-4

Basic information

Standard SMILES
O=c1ccn([C@H]2C[C@H](O)[C@@H](COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O2)c(=O)[nH]1
InChIKey
AHCYMLUZIRLXAA-SHYZEUOFSA-N
Molecular formula
C9H15N2O14P3
Average molar mass
468.14 g/mol
Monoisotopic mass
467.97361305

Overview

DUTP is a deoxyuridine phosphate having a triphosphate group at the 5'-position. It has a role as an Arabidopsis thaliana metabolite, a mouse metabolite, an Escherichia coli metabolite and a human metabolite. It is a deoxyuridine phosphate and a pyrimidine 2'-deoxyribonucleoside 5'-triphosphate. It is a conjugate acid of a dUTP(3-).

Names & identifiers

Preferred name
Deoxyuridine Triphosphate
IUPAC
[[(2R,3S,5R)-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate
English name
2'-Deoxyuridine-5'-triphosphate trisodium salt
Molecular formula
C9H16N2NaO14P3
Molecular weight
492.14

Names & synonyms

dUTPDeoxyuridine triphosphate1173-82-62'-Deoxyuridine 5'-triphosphatedeoxy-UTP[[(2R,3S,5R)-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphateCHEBI:176252'-deoxyuridine 5'-(tetrahydrogen triphosphate)2'-Deoxyuridine-5'-triphosphorate(((2R,3S,5R)-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxyoxolan-2-yl)methoxy-hydroxyphosphoryl) phosphono hydrogen phosphateRefChem:585755(((((((2R,3S,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3-hydroxyoxolan-2-yl)methoxy)(hydroxy)phosphoryl)oxy)(hydroxy)phosphoryl)oxy)phosphonic acid
Show more names
2'-dUTP2’dUTP,3NadUTP.Na3-C-βAids052149Aids-052149-Deoxy-β-Epi 2&rsquo
2'-deoxyuridine-5'-triphosphate102814-08-4DEOXYURIDINE-5'-TRIPHOSPHATEDeoxyuridine 5'-triphosphate2'-Deoxyuridine-5'-triphosphoric acid2'-Deoxyuracil 5'-triphosphate2'-Deoxyuridine-5'-triphosphate trisodium saltCHEMBL374361

Database identifiers

CAS
102814-08-4、1173-82-6、91918-34-2
PubChem CID
65070
DTXSID
DTXSID60908053
ChEMBL
CHEMBL374361
ChEBI
CHEBI:17625
Nikkaji
J315.490D

Properties

Computed structural properties

XLogP
-5.5
Topological polar surface area
239 Ų
Hydrogen bond donors
6
Hydrogen bond acceptors
14
Rotatable bonds
8
Heavy atoms
28

Experimental & physicochemical properties

Chemical ClassesBiological Agents -> Nucleic Acids and Derivatives
DrugsPharmaceuticals -> Listed in ZINC15
Physical DescriptionSolid
Collision Cross Section · 2 items

188.9 Ų [M+Na-2H]- [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]

188.9 Ų [M-2H+Na]-

Physicochemical properties

Melting point
150 o · >150o C (Dec.)
storage temp.
-20 °C · -20°C
solubility
Methanol (Slightly), Water (Slightly)
form
Powder
color
White
biological source
synthetic (organic)

Safety & regulation

Toxicology

Toxicity Summary · 1 item

Deoxyuridine triphosphate (dUTP) can be misincorporated into DNA and cause DNA damage. The extent of DNA damage caused by dUTP is dependent on the levels of the pyrophosphatase dUTPase and uracil-DNA glycosylase (UDG). DNA damage due to dUTP misincorporation is highly dependent on the levels of the pyrophosphatase dUTPase, which limits intracellular accumulation of dUTP. (A4337) Also, loss of viability following thymidylate synthase (TS) inhibition occurs as a consequence of accumulation of dUTP in some cell lines and subsequent misincorporation of uracil into DNA. (PMCID: PMC2364072)

Carcinogen ClassificationNo indication of carcinogenicity to humans (not listed by IARC).

Safety data

wgk
1
hs_code
29349990
risk_code
36/37/38
safety_code
26-36
Storage Class
11 - Combustible Solids

Chemistry & industry

Pharmacology

Metabolism/Metabolites · 1 item

Metabolism of organophosphates occurs principally by oxidation, by hydrolysis via esterases and by reaction with glutathione. Demethylation and glucuronidation may also occur. Oxidation of organophosphorus pesticides may result in moderately toxic products. In general, phosphorothioates are not directly toxic but require oxidative metabolism to the proximal toxin. The glutathione transferase reactions produce products that are, in most cases, of low toxicity. Paraoxonase (PON1) is a key enzyme in the metabolism of organophosphates. PON1 can inactivate some organophosphates through hydrolysis. PON1 hydrolyzes the active metabolites in several organophosphates insecticides as well as, nerve agents such as soman, sarin, and VX. The presence of PON1 polymorphisms causes there to be different enzyme levels and catalytic efficiency of this esterase, which in turn suggests that different individuals may be more susceptible to the toxic effect of organophosphate exposure.

Tissue LocationsEpidermis
Cellular LocationsMitochondria
Metabolite PathwaysBeta Ureidopropionase Deficiency

Uses & manufacturing

UsesThis is an endogenously produced metabolite found in the human body. It is used in metabolic reactions, catabolic reactions or waste generation.
Applications · 2 items

Uses2'-Deoxyuridine-5'-triphosphate trisodium salt may be used to study the distribution, specificity and kinetics of deoxyuridine 5′-triphosphate nucleotidohydrolase(s). 2'-Deoxyuridine-5'-triphosphate trisodium salt is important enzymes that protect cells from the incorporation of dUTP into DNA.

Uses2'-Deoxyuridine-5'-triphosphate disodium salt is used in conjunction with uracil DNA glycosylase to prevent carryover contamination in PCR. The dUTP is substituted for dTTP in the PCR reaction, used to study the distribution, specificity and kinetics of deoxyuridine 5-triphosphate nucleotidohydrolase(s) (dUTPase, EC 3.6.1.23). dUTPase are important enzymes that protect cells from the incorporation of dUTP into DNA.

Suppliers50 total

北京华美互利生物化工010-56205725 · [email protected]
阿诺西(上海)生物技术有限公司400-1107768 15058188853 · [email protected]
上海阿拉丁生化科技股份有限公司400-6206333 13167063860 · [email protected]
湖南韵邦生物科技股份有限公司85561037 15386497078 · [email protected]
南通飞宇生物科技有限公司0513-68819626 15152877458 · [email protected]
Additional notes · 1 item

DefinitionChEBI: DUTP is a deoxyuridine phosphate having a triphosphate group at the 5'-position. It has a role as a human metabolite, an Escherichia coli metabolite, a mouse metabolite and an Arabidopsis thaliana metabolite. It is a pyrimidine 2'-deoxyribonucleoside 5'-triphosphate and a deoxyuridine phosphate. It is a conjugate acid of a dUTP(3-).

Related reactions

24 records

Linked notes

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