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3'-Cmp

HCID 66535
NotesReactions
Basic informationOverviewNames & identifiersPropertiesSafety & regulationChemistry & industryRelated reactionsCompound notes
Substructure searchFind similar structures

Basic information

CAS
84-52-6
Standard SMILES
Nc1ccn([C@@H]2O[C@H](CO)[C@@H](OP(=O)(O)O)[C@H]2O)c(=O)n1
InChIKey
UOOOPKANIPLQPU-XVFCMESISA-N
Molecular formula
C9H14N3O8P
Average molar mass
323.2 g/mol
Monoisotopic mass
323.05185141

Overview

3'-CMP is a cytidine 3'-phosphate compound with a monophosphate group at the 3'-position. It has a role as a metabolite, a mouse metabolite and an Escherichia coli metabolite. It is a cytidine 3'-phosphate and a pyrimidine ribonucleoside 3'-monophosphate. It is a conjugate acid of a 3'-CMP(2-).

Names & identifiers

Preferred name
3'-Cmp
IUPAC
[(2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
English name
CYTIDINE 3'-MONOPHOSPHATE
Molecular formula
C9H14N3O8P
Molecular weight
323.2

Names & synonyms

Cytidine 3'-monophosphate84-52-63'-Cytidylic acid3'-CMP6DZL5I6D4DCHEBI:53013((2R,3S,4R,5R)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl) dihydrogen phosphate[(2R,3S,4R,5R)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] dihydrogen phosphateRefChem:5814123' CMP((3,4-dihydroxy-5-(2-hydroxy-4-imino-1,4-dihydropyrimidin-1-yl)oxolan-2-yl)methoxy)phosphonic acid201-537-5
Show more names
CYTIDINE 3Cytidilic acid b3-CYTIDYLIC ACID3'-Cytosylic acidCYTIDINE 3'-MONOPHOSCitidine 3'-phosphate3'(2')-Cytidylic Acid
Cytidine-3'-MonophosphateCytidine 3-monophosphateCytidine 3'-phosphateMFCD00006543Cytidine-3/'-MonophosphateCHEMBL258728[(2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphateST057096

Properties

Computed structural properties

XLogP
-3.8
Topological polar surface area
175 Ų
Hydrogen bond donors
5
Hydrogen bond acceptors
8
Rotatable bonds
4
Heavy atoms
21
Formal charge
0
Complexity
531

Experimental & physicochemical properties

DrugsPharmaceuticals -> Listed in ZINC15
SpringerMaterials PropertiesCrystal structure
Collision Cross Section · 2 items

170.98 Ų [M+H]+ [CCS Type: DT; Method: stepped-field]

169.8 Ų [M-H]-

Physicochemical properties

Melting point
230 °C · 230 °C
Boiling point
693.7 · 693.7±65.0 °C(Predicted)
Density
2.15 · 2.15±0.1 g/cm3(Predicted)
storage temp.
20 °C · −20°C
solubility
PBS (pH 7.2): slightly soluble,
pka
0.8 · 0.8, 4.28, 6.0(at 25℃)
form
solid
Water Solubility
Water: soluble
Merck
2788 · 2788
Stability
Hygroscopic

Safety & regulation

Safety information is for reference only and does not replace the supplier’s Safety Data Sheet (SDS), applicable regulations, or professional assessment.

Safety data

wgk
3
hs_code
29349990

Chemistry & industry

Pharmacology

Tissue LocationsPlacenta

Applications

UsesA metabolite of Cytidine (C998300). A highly specific phosphatase that acts on ADP-ribose 1''-phosphate, a metabolite of tRNA splicing in Saccharomyces cerevisiae.

Upstream & downstream products

Upstream raw materials

5')-cytidine">cytidylyl-(3'->5')-cytidinecytidine 2',3'-(hydrogen phosphate)CYTIDINE 3':5'-CYCLIC MONOPHOSPHATE5')CYTIDINE FREE ACID">ADENYLYL(3'>5')CYTIDINE FREE ACIDCytidine 5’-monophosphateCytidine

Downstream products

URIDYLIC ACIDCYTIDINE 2'-MONOPHOSPHATE

Suppliers28 total

北京华美互利生物化工010-56205725 · [email protected]
南京世洲生物科技有限公司025-85560043 15850508050 · [email protected]

Related reactions

1 records
New reaction record
HRID 848719 reaction equation
HRID 848719As reactantuspto-grants-1981_10

Compound notes

Loading…

On this pageBasic informationOverviewNames & identifiersPropertiesSafety & regulationChemistry & industryRelated reactionsCompound notes

Database identifiers

CAS
84-52-6
PubChem CID
66535
DTXSID
DTXSID301004260
ChEMBL
CHEMBL258728
ChEBI
CHEBI:53013
UNII
6DZL5I6D4D
EC Number
201-537-5
Nikkaji
J4.895J
InChI
InChI=1/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-6(14)7(4(3-13)19-8)20-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/s3
InChIKey
UOOOPKANIPLQPU-IKRYCBPCNA-N
SMILES
O[C@@H]1[C@@H]([C@@H](CO)O[C@H]1N1C=CC(N)=NC1=O)OP(O)(O)=O |&1:1,2,3,7,r|
CAS DataBase Reference
84 · 84-52-6(CAS DataBase Reference)
FDA UNII
6 DZL5I6D4D · 6DZL5I6D4D
WGK Germany
3 · 3
HS Code
29349990 · 29349990
江苏艾康生物医药研发有限公司025-025-66113011 15955137747 · [email protected]
武汉易泰科技有限公司上海分公司18930552037 · [email protected]
安耐吉化学&3A(安徽泽升科技股份有限公司)400-0056266 · [email protected]
上海瀚鸿科技股份有限公司021-54306202 13764082696 · [email protected]
上海相辉医药科技有限公司13761987713 · [email protected]
上海梅凯科技有限公司021-68689288 15300790979 · [email protected]
宝鸡缔都医药化工有限公司029-81145305 17791533577 · [email protected]
山东西亚化学有限公司13355009207 13355009207 · [email protected]
上海湄水化工科技有限公司021-60549325 18616193163
Labnetwork lnc.+86-27-50766799 +86-18062016861 · [email protected]
凯试(上海)科技有限公司021-50135380 · [email protected]
深圳振强药物研发有限公司+86-0755-66853366 +86-13670046396 · [email protected]
杭州六可生物科技有限公司+86-571-86912261 19975279805 · [email protected]
BOC Sciences16314854226 · [email protected]
BOC Sciences16314854226; +8616314854226 · [email protected]
厦门盈融达化工有限公司+86-0592-6210733 · [email protected]
南通韦恩迪医药科技有限公司18071612016 · [email protected]
ChemeGen 中国18818260767 · [email protected]
深圳瑞恺德生物科技有限公司0755-61348847 17820674378 · [email protected]
北京百灵威科技有限公司18210857532 18210857532 · [email protected]
DAYANG CHEM (HANGZHOU) CO.,LTD+86-88938639 +86-17705817739 · [email protected]
TargetMol中国(陶术生物)15002134094 · [email protected]
Hefei TNJ Chemical Industry Co.,Ltd.+86-0551-65418671 +86-189 4982 3763 · [email protected]
Honest Joy Holdings Limited755-36694831 +8613798234863 · [email protected]
Dideu Industries Group Limited+86-29-81148696 +86-15129568250 · [email protected]
陕西奥博利辉新材料科技有限公司0917-18691729 18691729963 · [email protected]

Additional notes

DefinitionChEBI: A cytidine 3'-phosphate compound with a monophosphate group at the 3'-position.