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(2S,4R)-Pentane-1,2,3,4,5-Pentol

HCID 6912
NotesReactions
Basic informationOverviewNames & identifiersPropertiesSafety & regulationChemistry & industryRelated reactionsCompound notes
Substructure searchFind similar structures

Basic information

CAS
488-81-3
Standard SMILES
OC[C@@H](O)C(O)[C@@H](O)CO
InChIKey
HEBKCHPVOIAQTA-NGQZWQHPSA-N
Molecular formula
C5H12O5
Average molar mass
152.15 g/mol
Monoisotopic mass
152.06847348

Overview

Ribitol is a pentitol (five-carbon sugar alcohol) having meso-configuration, being derived from ribose by reduction of the carbonyl group. It occurs naturally in the plant Adonis vernalis. It has a role as a plant metabolite, a human metabolite and a Daphnia magna metabolite.

Names & identifiers

Preferred name
(2S,4R)-Pentane-1,2,3,4,5-Pentol
IUPAC
(2R,4S)-pentane-1,2,3,4,5-pentol
English name
ADONITOL
Molecular formula
C5H12O5
Molecular weight
152.15

Names & synonyms

(2S,4R)-pentane-1,2,3,4,5-pentolGlyTouCan:G06874YZRefChem:934805G06874YZxylitolribitoladonitol488-81-387-99-0XyliteD-XylitolAdonit
Show more names
D-(+)-Arabitol[UL-13C5]ribitol(2R,3s,4S)-pentane-1,2,3,4,5-pentaolRIBITOAdonitoAdanitol
AdoniteEutritKlinitXylitonXylite (sugar)KannitD-ribitolNewtol

Database identifiers

CAS
488-81-3、87-99-0
PubChem CID
6912
DTXSID
DTXSID601032335
ChEMBL
CHEMBL1865120
ChEBI
CHEBI:15963
UNII
353ZQ9TVDA、VCQ006KQ1E
Nikkaji
J3.905E、J6.033J

Properties

Computed structural properties

XLogP
-2.5
Topological polar surface area
101 Ų
Hydrogen bond donors
5
Hydrogen bond acceptors
5
Rotatable bonds
4
Heavy atoms
10
Formal charge
0
Complexity
76.1

Experimental & physicochemical properties

DrugsPharmaceuticals -> Listed in ZINC15
CosmeticsSkin conditioning; Humectant
SpringerMaterials PropertiesCrystal structure
Animal DrugsPharmaceuticals -> UK Veterinary Medicines Directorate List
Boiling Point215-217
Melting Point92-96
Collision Cross Section · 5 items

139.14 Ų [M+K]+ [CCS Type: TW; Method: calibrated with polyalanine and drug standards]

127.92 Ų [M-H]- [CCS Type: DT; Method: stepped-field]

136.3 Ų [M+Na]+ [CCS Type: DT; Method: single field calibrated with Agilent tune mix (Agilent)]

136.2 Ų [M+Na]+ [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]

126.1 Ų [M-H]-

Physicochemical properties

Safety & regulation

Safety information is for reference only and does not replace the supplier’s Safety Data Sheet (SDS), applicable regulations, or professional assessment.

Safety data

F
3-10
PPE
Eyeshields, Gloves, type N95 (US)
wgk
3
tsca
TSCA listed
rtecs
VJ0800000
hs_code
29054990
risk_code
36/37/38
Signal word
Danger
Symbol(GHS)
GHS05,GHS07
hazard_code
Xi
safety_code
24/25-36-26
Storage Class
11 - Combustible Solids
Hazard statements
H302+H312+H332-H314
Precautionary statements
P501-P260-P270-P271-P264-P280-P362+P364-P303+P361+P353-P301+P330+P331-P301+P312+P330-P304+P340+P310-P305+P351+P338+P310-P405

Chemistry & industry

Pharmacology

Protein BindingNo pharmacokinetic data available.
Pharmacodynamics · 1 item

There has been evidence of xylitol in dental hygiene in reducing dental caries disease and also reversing the process of early caries. Xylitol increases salivary flow and pH, reduces the levels of _Streptococcus mutans_ in plaque and saliva and reduces the adhesion on the microorganism to the teeth surface. _Streptococcus mutans_ is the main target plaque microorganism, but xylitol may potentially have inhibitory actions against several other bacterial species. It prevents a shift of the bacterial community towards a more cariogenic microflora in oral environment. Oral ingestion of xylitol causes a smaller rise in plasma glucose and insulin concentrations than does the ingestion of glucose in healthy men and diabetics.

Mechanism of Action · 1 item

Xylitol is initially taken up by the microorganism and accumulates intracellularly. Accumulated xylitol is transported into an energy-consuming cycle, or the inducible fructose transport system. It is converted to non-metabolizable, toxic xylitol-5-phosphate via phosphoenolpyruvate: a constitutive fructose phosphotransferase system by _S. mutans_. This metabolic process of xylitol, without the gain of any energy molecules, results in the development of intracellular vacuoles and cell membrane degradation. _S. mutans_ dephosphorylates xylitol-5-phosphate and expels it from the cell, in which requires energy consumption. This ultimately leading to starving of microorganism and growth inhibition. Long-term exposure to xylitol can cause microorganisms to develop resistance to xylitol. This clinically beneficial selection process creates xylitol-resistant mutans strains that are less virulent and less cariogenic than their parent strains. Xylitol also increases the concentrations of ammonia and amino acids in plaque, thereby neutralizing plaque acids. A study suggests that xylitol may also promote remineralization of deeper layers of demineralized enamel by facilitating Ca2+ and phosphate movement and accessibility.

Biological Half-LifeNo pharmacokinetic data available.
Metabolism/Metabolites · 1 item

In mammals, xylitol is mainly metabolized in the liver where it is oxidized to D-xylulose by xylitol dehydrogenase and cofactor NAD. D-xyluose is further phosphorylated and metabolized by xylulose kinase to xylulose 5-phosphate (Xu5P), an intermediate of the nonoxidative branch of the pentose phosphate pathway. Xu5P is reported to activate nuclear transport and the DNA-binding activities of carbohydrate response element binding protein (ChREBP) via activation of activation of protein phosphatase 2A (PP2A) _in vitro_. Activation of ChREBP thereby upregulates the gene transcription of lipogenic enzymes in vitro, which may stimulate lipogenesis in the liver.

Related reactions

2 records
New reaction record
HRID 426973 reaction equation
HRID 426973As reactantuspto-grants-1979_10
HRID 705058 reaction equation
HRID 705058As reactantuspto-grants-2015_11

Compound notes

Loading…

On this pageBasic informationOverviewNames & identifiersPropertiesSafety & regulationChemistry & industryRelated reactionsCompound notes
Melting point
102 · 102-105 °C
Boiling point
194.6 °C · 194.6°C (rough estimate)
Density
1.1497 · 1.1497 (rough estimate)
refractive index
1.392 · 1.3920 (estimate)
storage temp.
Inert atmosphere,Room Temperature
solubility
5 mg/mL; · DMF: 5mg/mL; DMSO: 25mg/mL; PBS (pH 7.2): 5mg/mL
form
Fine Crystalline Powder
pka
13.24 · 13.24±0.20(Predicted)
color
White
PH
5.5 · 5.5-7.0 (100g/l, H2O, 25℃)
Water Solubility
Soluble in water (100 mg/ml).
Sensitive
Hygroscopic
Merck
14 · 14,168
BRN
1720524 · 1720524
Henry's Law Constant
4.6 · 4.6×1011 mol/(m3Pa) at 25℃, Compernolle and Müller (2014)
Stability
Stable. Combustible. Incompatible with strong oxidizing agents.
InChI
1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4+,5-
InChIKey
HEBKCHPVOIAQTA-ZXFHETKHSA-N
SMILES
OC[C@H](O)[C@H](O)[C@H](O)CO
LogP
-3.77 · -3.770 (est)
CAS DataBase Reference
488 · 488-81-3(CAS DataBase Reference)
EWG's Food Scores
1 · 1
FDA UNII
353 ZQ9TVDA · 353ZQ9TVDA
EPA Substance Registry System
Ribitol (488-81-3)
UNSPSC Code
41116107 · 41116107
NACRES
25 · NA.25
Symbol(GHS)
5 · GHS05,GHS07
Signal word
Danger
Hazard statements
302 · H302+H312+H332-H314
Precautionary statements
501 · P501-P260-P270-P271-P264-P280-P362+P364-P303+P361+P353-P301+P330+P331-P301+P312+P330-P304+P340+P310-P305+P351+P338+P310-P405
PPE
95 · Eyeshields, Gloves, type N95 (US)
Hazard Codes
Xi
Risk Statements
36 · 36/37/38
Safety Statements
24 · 24/25-36-26
WGK Germany
3 · 3
RTECS
800000 · VJ0800000
F
3 · 3-10
TSCA
TSCA listed
HS Code
29054990 · 29054990
Storage Class
11 · 11 - Combustible Solids
Absorption, Distribution and Excretion · 4 items

Xylitol is absorbed in the small intestine via passive diffusion with a slow absorption rate.

No pharmacokinetic data available.

No pharmacokinetic data available.

No pharmacokinetic data available.

Uses & manufacturing

Use ClassificationCosmetics -> Skin conditioning; Humectant
Applications · 3 items

UsesA sugar alcohol formed by the reduction of ribose

UsesAdonitol is metabolized to teicholic acids used in the cell walls of gram positive bacteria. Adonitol is often compared to other cell permeating molecules such as formamide, propanediol, and DMSO as a cryopreservation agent.

General DescriptionAdonitol (Ribitol), a pentose alcohol, is metabolized to teicholic acids used in the cell walls of gram positive bacteria. Adonitol is often compared to other cell permeating molecules such as formamide, propanediol, and DMSO as a cryopreservation agent.

Upstream & downstream products

Downstream products

L-erythro-2-Pentulose (9CI)

Suppliers100 total

国药集团化学试剂有限公司86-21-63210123 · [email protected]
北京华美互利生物化工010-56205725 · [email protected]
梯希爱(上海)化成工业发展有限公司021-67121386 · [email protected]
上海阿拉丁生化科技股份有限公司400-6206333 13167063860 · [email protected]
Shandong chuangyingchemical Co., Ltd.18853181302 · [email protected]
南京迪恩赛尔生物科技有限公司19951952469 · [email protected]
河北创之源生物科技有限公司13012111162 · [email protected]
武汉欣扬瑞和化学科技有限公司153-07155313 15307155313 · [email protected]
温州共赢化学有限公司+86-0086-577-64498589 +86-15355981851 · [email protected]
爱斯特(成都)生物制药股份有限公司+86-28-85122536 85324413 · [email protected]
上海如吉生物科技发展有限公司+86-21-65211385-8001 36031160 · [email protected]
科瑞迪化学400-821-5857 021-64326257 · [email protected]
上海迈瑞尔生化科技有限公司4006356688 18621169109 · [email protected]
武汉易泰科技有限公司上海分公司18930552037 · [email protected]
大连美仑生物技术有限公司0411-62910999 13889544652 · [email protected]
阿法埃莎(中国)化学有限公司400-6106006 · [email protected]
安耐吉化学&3A(安徽泽升科技股份有限公司)400-0056266 · [email protected]
北京绿百草科技发展有限公司010-61136123 · [email protected]
上海瀚鸿科技股份有限公司021-54306202 13764082696 · [email protected]
上海诗丹德标准技术服务有限公司021-021-57127007-6622-6622 17621252073 · [email protected]
成都普思生物科技股份有限公司028-85370565-229 18080489829 · [email protected]
山东西亚化学有限公司13355009207 13355009207 · [email protected]
玛雅试剂+86 (573) 82222445 (0)18006601000 452520369 · [email protected]
四川库利南科技有限公司400-1166-196 18981987031 · [email protected]
天津希恩思生化科技有限公司400 638 7771 · [email protected]
湖南汇百侍生物科技有限公司0731-85526065 13308475853 · [email protected]
上海源叶生物科技有限公司18916372613 · [email protected]
艾科试剂4008-755-333 18080918076 · [email protected]
上海思域化工科技有限公司86-21-34053660 · [email protected]
赛默飞世尔科技(中国)有限公司800-810-5118 · [email protected]
北京伊诺凯科技有限公司400-810-7969 010-59572699 · [email protected]
AdooQ BioScience, LLC+1 (866) 930-6790 · [email protected]
TCI AMERICA800-4238616 · [email protected]
TOKYO CHEMICAL INDUSTRY CO., LTD.03-36680489 · [email protected]
TCI Europe320-37350700 · [email protected]
深圳振强药物研发有限公司0755-66853366 13670046396 · [email protected]
南京杜莱生物技术有限公司025-84699383-8003;025-846993838003-8003 18013301590 · [email protected]
上海陶素生化科技有限公司021-33632979 · [email protected]
上海汇凯化学科技有限公司021-61995394 18916691159 · [email protected]
上海倍卓生物科技有限公司021-61119791,13386096464 · [email protected]
上海将来实业股份有限公司400-0066400 13621662912 · [email protected]
上海将来实业股份有限公司021-61552785 · [email protected]
安徽科迪达化工有限公司0554-2106669 · [email protected]
天津阿尔塔科技有限公司022-65378550-8551 · [email protected]
四川省维克奇生物科技有限公司028-81700200 18116577057 · [email protected]
雷丁试剂0510-85629785 18013409632 · [email protected]
上海创赛科技有限公司400-6087598 15021221957 · [email protected]
上海麦克林生化科技股份有限公司15221275939 15221275939 · [email protected]
杭州杰恒化工有限公司0571-87396432 · [email protected]
上海永叶生物科技有限公司86-021-61559134 15921386130 · [email protected]

Additional notes

DefinitionChEBI: A ribitol compound having meso-configuration. It occurs naturally in the plant Adonis vernalis.