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1-O-[(2R,3S,6R)-4-methoxy-16,18-dioxa-10-azapentacyclo[11.7.0.02,6.06,10.015,19]icosa-1(20),4,13,15(19)-tetraen-3-yl] 4-O-methyl 2-hydroxy-2-(4-hydroxy-4-methylpentyl)butanedioate

HCID 72332
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Basic information

CAS
26833-87-4
Standard SMILES
COC(=O)CC(O)(CCCC(C)(C)O)C(=O)O[C@@H]1C(OC)=C[C@]23CCCN2CCc2cc4c(cc2[C@@H]13)OCO4
InChIKey
HYFHYPWGAURHIV-ZEDNPHJLSA-N
Molecular formula
C29H39NO9
Average molar mass
545.6 g/mol
Monoisotopic mass
545.26248182

Names & identifiers

Preferred name
1-O-[(2R,3S,6R)-4-methoxy-16,18-dioxa-10-azapentacyclo[11.7.0.02,6.06,10.015,19]icosa-1(20),4,13,15(19)-tetraen-3-yl] 4-O-methyl 2-hydroxy-2-(4-hydroxy-4-methylpentyl)butanedioate
IUPAC
1-O-[(2R,3S,6R)-4-methoxy-16,18-dioxa-10-azapentacyclo[11.7.0.02,6.06,10.015,19]icosa-1(20),4,13,15(19)-tetraen-3-yl] 4-O-methyl 2-hydroxy-2-(4-hydroxy-4-methylpentyl)butanedioate
English name
Homoharringtonine
Molecular formula
C29H39NO9
Molecular weight
545.63

Names & synonyms

1-O-[(2R,3S,6R)-4-methoxy-16,18-dioxa-10-azapentacyclo[11.7.0.02,6.06,10.015,19]icosa-1(20),4,13,15(19)-tetraen-3-yl] 4-O-methyl 2-hydroxy-2-(4-hydroxy-4-methylpentyl)butanedioateNSC141633SCHEMBL14698329HSCI1_000363BRD-A82300017-001-01-1O1-(methoxy[?]yl) O4-methyl 2-hydroxy-2-(4-hydroxy-4-methyl-pentyl)butanedioateHHTOmacetaxine MepesuccinateOmacetaxineHHT2ORW2SKR3
Show more names
ACVRL1ACVRLK1CGX 635Myelostat

Database identifiers

CAS
26833-87-4
PubChem CID
72332

Properties

Computed structural properties

XLogP
0.8
Topological polar surface area
124 Ų
Hydrogen bond donors
2
Hydrogen bond acceptors
10
Rotatable bonds
11
Heavy atoms
39
Formal charge
0
Complexity
968

Physicochemical properties

Melting point
144 · 144-146 C
Boiling point
619.03 °C · 619.03°C (rough estimate)
Density
1.2395 · 1.2395 (rough estimate)
refractive index
1.629 · 1.6290 (estimate)
storage temp.
2 · 2-8°C
solubility
20 mg/mL, · DMSO: soluble20mg/mL, clear
form
powder
pka
11.6 · 11.60±0.29(Predicted)
color
white to beige
biological source
mouse
optical activity
-120 to · [α]/D -120 to -140°, c = 1 in chloroform-d
InChIKey
DJIVDDPFKDEQIR-XSEHADPMSA-N
SMILES
O([C@@H]1C(=C[C@]23CCCN2CCC2C=C4OCOC4=CC=2[C@]13[H])OC)C(=O)[C@](O)(CC(=O)OC)CCCC(O)(C)C |&1:1,4,20,26,r|
NCI Dictionary of Cancer Terms
homoharringtonine; omacetaxine mepesuccinate
FDA UNII
6 FG8041S5B · 6FG8041S5B

Safety & regulation

Safety information is for reference only and does not replace the supplier’s Safety Data Sheet (SDS), applicable regulations, or professional assessment.

Safety data

wgk
3
rtecs
FK0260000
ridadr
UN 1544 6.1/PG 2
risk_code
26/27/28-36/37/38-28
Signal word
Danger
Symbol(GHS)
GHS06
hazard_code
T+,Xi
safety_code
36/37/39-45-27-26-36/37-28
hazard_class
6.1(a)
Storage Class
6.1A - Combustible acute toxic Cat. 1 and 2very toxic hazardous materials
packing_group
II
Hazard statements
H300+H310+H330
Hazard Classifications
Acute Tox. 2 DermalAcute Tox. 2 InhalationAcute Tox. 2 Oral
Precautionary statements
P262-P280-P301+P310+P330-P302+P352+P310-P304+P340+P310

Chemistry & industry

Applications · 5 items

DescriptionOmacetaxine mepesuccinate (also known as homoharringtonine) was approved by the US FDA in October 2012 for the treatment of patients with chronic or accelerated phase chronic myeloid leukemia (CML) with resistance or intolerance to at least two tyrosine kinase inhibitors (TKIs). Omacetaxine is a protein synthesis inhibitor that was studied in the 1970s for the treatment of acute myeloid leukemia (AML) and in the 1990s for CML. Emergence of resistance to first- and second-generation TKIs has lead to renewed interest in omacetaxine due to its differentiated mode of action. Omacetaxine acts on the initial step of protein translation andresults in the rapid loss of a number of short-lived proteins that regulate proliferation and cell survival. Omacetaxine induces apoptosis and shows in vitro activity in anumberof leukemia cell lines andinmurine leukemiamodels. Omacetaxineis a naturally occurring alkaloid isolated from Cephalotaxus coniferous shrubs that are indigenous to Asia. Extracts of the bark have been used by practitioners of traditional Chinese medicine for the treatment of cancer. Although omacetaxine could be isolated directly from bark and roots, a more efficient approach is semi-synthesis by esterification of the abundant biosynthetic precursor cephalotaxine, which can be extracted from leaves rather than nonrenewable sources. Esterification is carried out with an activated ester in which the diol side-chain is protected as a tetrahydropyran; after ester formation, the diol is released in two steps under mild conditions.

DescriptionHomoharringtonine is an alkaloid originally isolated from C. harringtonia and a homolog of harringtonine that has diverse biological activities including protein synthesis inhibitory, antiviral, antiparasitic, and anticancer properties. Homoharringtonine inhibits the chain elongation phase of translation in eukaryotes. It inhibits diphenylalanine formation by rabbit reticulocyte and human placental ribosomes in cell-free assays and binds to human 80S ribosomes (Kd = 39 nM). Homoharringtonine is active against coronaviruses, reducing the viral load in vitro and in vivo and prevents severe symptoms in porcine and chicken models of porcine epidemic diarrhea virus (PEDV) and Newcastle disease virus (NDV), respectively. It reduces the infectious virus yield and viral RNA copy numbers in the culture supernatant of Vero E6 cells infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) (EC50s = 2.55 and 2.14 μM, respectively). It also inhibits the growth of P. falciparum in cultured in human erythrocytes (IC50 = 4 nM). Homoharringtonine is cytotoxic and inhibits the proliferation of Jurkat acute T cell leukemia (IC50 = 9 nM) and K562 chronic myelogenous leukemia (CML) cells (IC50 = 408 μg/ml). In vivo, it decreases the number of peripheral leukemia stem cells and increases survival in CML and B cell acute lymphoblastic leukemia (B-ALL) mouse models when administered at a dose of 0.5 mg/kg. Formulations containing homoharringtonine have been used in the treatment of CML in patients with resistance and/or intolerance to two or more tyrosine kinase inhibitors.

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Compound notes

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NCI Drug Dictionary
omacetaxine
ATC code
1 XX40 · L01XX40
UNSPSC Code
12352203 · 12352203
NACRES
77 · NA.77
Symbol(GHS)
6 · GHS06
Signal word
Danger
Hazard statements
300 · H300+H310+H330
Precautionary statements
262 · P262-P280-P301+P310+P330-P302+P352+P310-P304+P340+P310
Hazard Codes
T+,Xi
Risk Statements
26 · 26/27/28-36/37/38-28
Safety Statements
36 · 36/37/39-45-27-26-36/37-28
RIDADR
1544 · UN 1544 6.1/PG 2
WGK Germany
3 · 3
RTECS
260000 · FK0260000
HazardClass
6.1 · 6.1(a)
PackingGroup
II
Storage Class
6.1 A · 6.1A - Combustible acute toxic Cat. 1 and 2very toxic hazardous materials
Hazard Classifications
2 DermalAcute · Acute Tox. 2 DermalAcute Tox. 2 InhalationAcute Tox. 2 Oral

HistoryIn China, especially in Fujian, etc., doctors have treated tumor with Cephalotaxus harringtonia long ago. In the early 1970s, American scientists Powell etal. isolated and identified the alkaloids of the Cephalotaxus plant and studied its antitumor activity. One type of the alkaloids (Cephalotaxine ester, including harringtonine, homoharringtonine, isoharringtonine, deoxyharringtonine, and pseudodeoxyharringtonine) was found to have the effect of inhibiting the proliferation of mouse leukemia cells . Chinese scientists also isolated a large number of harringtonine and homoharringtonine and used them to treat leukemia. Then, the United States and other developed countries’ scientists carried out the Phase I and II clinical research and toxicology research of homoharringtonine.

UsesHomoharringtonine (HHT) combined with some botanical drugs could induce cancer cells to resemble normal cells. HHT was prepared by a semi-synthetic method from Cephalotaxine, a major alkaloid of Cepahlotaxus species through the formation of a-ketoes

UsesHomoharringtonine has been used to check the cytotoxic activity against carfilzomib-resistant derivative of the LP-1 multiple myeloma (MM) cell line (LP-1/Cfz) and is used as a translation-inhibiting drug.

Additional notes

DefinitionChEBI: A cephalotaxine-derived alkaloid ester obtained from Cephalotaxus harringtonia; used for the treatment of chronic or accelerated phase chronic myeloid leukaemia.