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Pradimicin FA 1

HCID 72469
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Basic information

CAS
131426-58-9
Standard SMILES
CN[C@@H]1[C@H](O)[C@@H](O[C@@H]2OC[C@@H](O)[C@H](O)[C@H]2O)[C@H](O[C@H]2c3cc(C)c(C(=O)N[C@@H](CO)C(=O)O)c(O)c3-c3c(cc4c(c3O)C(=O)c3cc(OC)cc(O)c3C4=O)[C@@H]2O)O[C@@H]1C
InChIKey
IABQXKYWFNKIFA-HBFDRNORSA-N
Molecular formula
C40H44N2O19
Average molar mass
856.8 g/mol
Monoisotopic mass
856.25382718

Overview

structure given in first source; isolated from Actinomadura hibisca

Names & identifiers

Preferred name
Pradimicin FA 1
IUPAC
(2S)-3-hydroxy-2-[[(5S,6S)-1,6,9,14-tetrahydroxy-5-[(2S,3R,4S,5R,6R)-4-hydroxy-6-methyl-5-(methylamino)-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-11-methoxy-3-methyl-8,13-dioxo-5,6-dihydrobenzo[a]tetracene-2-carbonyl]amino]propanoic acid

Names & synonyms

Pradimicin FA 1131426-58-9RefChem:175694D-Serine, N-((5-((4,6-dideoxy-4-(methylamino)-3-O-beta-D-xylopyranosyl-beta-D-galactopyranosyl)oxy)-5,6,8,13-tetrahydro-1,6,9,14-tetrahydroxy-11-methoxy-3-methyl-8,13-dioxobenzo(a)naphthacen-2-yl)carbonyl)-, (5S-trans)-pradimicin FA-1(2S)-3-hydroxy-2-[[(5S,6S)-1,6,9,14-tetrahydroxy-5-[(2S,3R,4S,5R,6R)-4-hydroxy-6-methyl-5-(methylamino)-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-11-methoxy-3-methyl-8,13-dioxo-5,6-dihydrobenzo[a]tetracene-2-carbonyl]amino]propanoic acidSCHEMBL29711272D-Serine, N-((5-((4,6-dideoxy-4-(methylamino)-3-O-beta-D-xylopyranosyl-beta-D-galactopyranosyl)oxy)-5,6,8,13-tetrahydro-1,6,9,14-tet

Database identifiers

CAS
131426-58-9
PubChem CID
72469

Properties

Computed structural properties

XLogP
-2.9
Topological polar surface area
341 Ų
Hydrogen bond donors
12
Hydrogen bond acceptors
20
Rotatable bonds
10
Heavy atoms
61
Formal charge
0
Complexity
1,620

Related reactions

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Compound notes

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