Shikimic Acid

HCID 8742

Basic information

CAS
138-59-0
Standard SMILES
O=C(O)C1=C[C@@H](O)[C@@H](O)[C@H](O)C1
InChIKey
JXOHGGNKMLTUBP-HSUXUTPPSA-N
Molecular formula
C7H10O5
Average molar mass
174.15 g/mol
Monoisotopic mass
174.05282342

Overview

Shikimic acid is a cyclohexenecarboxylic acid that is cyclohex-1-ene-1-carboxylic acid substituted by hydroxy groups at positions 3, 4 and 5 (the 3R,4S,5R stereoisomer). It is an intermediate metabolite in plants and microorganisms. It has a role as a Saccharomyces cerevisiae metabolite, a plant metabolite and an Escherichia coli metabolite. It is a cyclohexenecarboxylic acid, a hydroxy monocarboxylic acid and an alpha,beta-unsaturated monocarboxylic acid. It is a conjugate acid of a shikimate.

Names & identifiers

Preferred name
Shikimic Acid
IUPAC
(3R,4S,5R)-3,4,5-trihydroxycyclohexene-1-carboxylic acid
English name
Shikimic acid
Molecular formula
C7H10O5
Molecular weight
174.15

Names & synonyms

shikimic acid138-59-0(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID1-cyclohexene-1-carboxylic acid, 3,4,5-trihydroxy-, (3R,4S,5R)-Bracken fern toxic component(3R,4S,5R)-3,4,5-trihydroxycyclohexene-1-carboxylic acid3alpha,4alpha,5beta-Trihydroxy-1-cyclohexene-1-carboxylic acid29MS2WI2NUVEROCHICDTXSID40320391-Cyclohexene-1-carboxylic acid, 3,4,5-trihydroxy-, (3R-(3alpha,4alpha,5beta))-3,4,5-Trihydroxy-1-cyclohexenecarboxylic acid
Show more names
Shikimate(-)-SHIKIMIC ACIDsikimic acidKava root extractSkikimic acidKava Kava Extract(3R,4S,5R)-3,4,5-TRIHYDROXY-1-CYCLOHEXENECARBOXYLIC ACID(3R,4S,5R)-3,4,5-TRIHYDROXY-CYCLOHEX-1-ENECARBOXYLIC ACIDShikimic
CHEBI:16119NSC-59257Acid, ShikimicShikimic Acid DerivativesRefChem:885013DTXCID2012039205-334-2L-Shikimic acid

Database identifiers

CAS
138-59-0
PubChem CID
8742
DTXSID
DTXSID4032039
ChEMBL
CHEMBL290345
ChEBI
CHEBI:16119
UNII
29MS2WI2NU
EC Number
205-334-2
Nikkaji
J3.267K

Properties

Computed structural properties

XLogP
-1.7
Topological polar surface area
98 Ų
Hydrogen bond donors
4
Hydrogen bond acceptors
5
Rotatable bonds
1
Heavy atoms
12

Experimental & physicochemical properties

Chemical ClassesOther Classes -> Organic Acids
Color/FormNeedles from methanol/ethyl acetate
Solubility · 3 items

Water solubility = 1.5X10+5 mg/l @ 21 °C

Solubility in water about 18 g/100 ml; solubility @ 23 °C (g/100 ml): 2.25 in absolute alcohol, 0.015 in anhydrous ether; practically insoluble in chloroform, benzene, petroleum ether

150 mg/mL at 21 °C

DecompositionWhen heated to decomposition it emits acrid smoke and irritating fumes.
Melting Point · 2 items

183-184.5 °C

186 °C

Vapor Pressure0.00000001 [mmHg]

Physicochemical properties

Melting point
185 · 185-187 °C (lit.)
alpha
-180 · -180 º (c=4, H2O 25 ºC)
Boiling point
225.11 °C · 225.11°C (rough estimate)
Density
1.52 g/cm3 · 1.52 g/cm3 (27.2℃)
vapor pressure
0 Pa · 0Pa at 25℃
refractive index
-180 ° · -180 ° (C=1, H2O)

Safety & regulation

GHS classification

GHS Classification · 5 items

This chemical does not meet GHS hazard criteria for 8.3% (3 of 36) of reports.

Danger

H318 (86.1%): Causes serious eye damage [Danger Serious eye damage/eye irritation]

P264+P265, P280, P305+P354+P338, and P317 (click each P-code to see the statement)

Aggregated GHS information provided per 36 reports by companies from 4 notifications to the ECHA C&L Inventory.

Hazard information

Regulatory Information · 2 items

REACH registered substance: (3R,4S,5R)-3,4,5-trihydroxycyclohex-1-enecarboxylic acid (EC: 205-334-2)

1-Cyclohexene-1-carboxylic acid, 3,4,5-trihydroxy-, (3R,4S,5R)-: Does not have an individual approval but may be used under an appropriate group standard

Hazards SummaryMay cause irritation; [MSDSonline] Intraperitoneal LD50 (mouse) = 1,000 mg/kg; [HSDB]
Special Reports · 1 item

STAVRIC B, STOLTZ DR; SHIKIMIC ACID; FOOD COSMET TOXICOL 14: 141 (1976). A REVIEW DISCUSSING NATURAL OCCURRENCE, FORMATION AS AN INTERMEDIATE IN THE SYNTHESIS OF SEVERAL AROMATIC COMPOUNDS FROM CARBOHYDRATES, PHYSICAL PROPERTIES, CHEMICAL STRUCTURE, THE TOXIC COMPONENT OF BRAKEN FERN, CARCINOGENICITY, BIOLOGICAL DISTRIBUTION & ANALYTICAL METHODS USED FOR ITS IDENTIFICATION.

Hazard Classes and CategoriesEye Dam. 1 (86.1%)

Safety & protection

Disposal Methods · 1 item

SRP: At the time of review, criteria for land treatment or burial (sanitary landfill) disposal practices are subject to significant revision. Prior to implementing land disposal of waste residue (including waste sludge), consult with environmental regulatory agencies for guidance on acceptable disposal practices.

Toxicology

Environmental Fate · 3 items

TERRESTRIAL FATE: Based on a recommended classification scheme(1), an estimated Koc value of 6(SRC), determined from an experimental water solubility(2,SRC) and a recommended regression-derived equation(3), indicates that shikimic acid is expected to have very high mobility in soil(SRC). Volatilization of shikimic acid from moist soil surfaces is not expected(SRC) given an estimated Henry's Law constant of 2.7X10-14 atm-cu m/mole(SRC), using a fragment constant estimation method(4). Shikimic acid is not expected to volatilize from dry soil surfaces based on an estimated vapor pressure of 5.0X10-9 mm Hg(SRC), determined from a fragment constant method(5). Aerobic biodegradation of shikimic acid by bacteria of the genera Pseudomonas, Flavobacterium, Achromobacter, and Xanthomonas was relatively rapid; oxygen uptake by the bacteria was approximately 150 ul after 120 minutes(6). Also, it was determined that benthic microorganisms isolated from bottom sediment of a eutrophic lake were able to utilize shikimic acid as a source of carbon(7).

AQUATIC FATE: Based on a recommended classification scheme(1), an estimated Koc value of 6(SRC), determined from an experimental water solubility(2,SRC) and a recommended regression-derived equation(3), indicates that shikimic acid is not expected to adsorb to suspended solids and sediment in water(SRC). Shikimic acid is not expected to volatilize from water surfaces(3,SRC) based on an estimated Henry's Law constant of 2.7X10-14 atm-cu m/mole(SRC), developed using a fragment constant estimation method(4). According to a classification scheme(5), an estimated BCF value of 0.74(3,SRC), from an experimental water solubility(2,SRC), suggests that bioconcentration in aquatic organisms is low(SRC). Aerobic biodegradation of shikimic acid by bacteria of the genera Pseudomonas, Flavobacterium, Achromobacter, and Xanthomonas was relatively rapid; oxygen uptake by the bacteria was approximately 150 ul after 120 minutes(6). Also, it was determined that benthic microorganisms isolated from bottom sediment of a eutrophic lake were able to utilize shikimic acid as a source of carbon(7).

ATMOSPHERIC FATE: According to a model of gas/particle partitioning of semivolatile organic compounds in the atmosphere(1), shikimic acid, which has an estimated vapor pressure of 5.0X10-9 mm Hg at 25 °C(2,SRC), is expected to exist almost entirely in the particulate phase in the ambient atmosphere. Vapor-phase shikimic acid is degraded in the atmosphere by reaction with photochemically-produced hydroxyl radicals(SRC); the half-life for this reaction in air is estimated to be about 6.3 hours(3,SRC). Particulate-phase shikimic acid may be physically removed from the air by wet and dry deposition(SRC).

Soil Adsorption/Mobility · 1 item

The Koc of shikimic acid is estimated as approximately 6(SRC), using a measured water solubility of 1.5X10+5 mg/l(1) and a regression-derived equation(2,SRC). According to a recommended classification scheme(3), this estimated Koc value suggests that shikimic acid is expected to have very high mobility in soil(SRC).

Natural Pollution SourcesShikimic acid as been identified as a component of bracken fern, Pteridium aquilinum(1).
Artificial Pollution SourcesShikimic acid's production and use as an active component in the flotation reagent Quebracho, a depressant for carbonates, fluorite, and non-sulfides(1) may result in its release to the environment(SRC).
Environmental Biodegradation · 1 item

At 100 ppm shikimic acid, the oxygen uptake by selected aerobic bacteria of the genera Pseudomonas, Flavobacterium, Achromobacter, and Xanthomonas (obtained from garden soil, compost, and sediment from a waste lagoon of a petroleum refinery catalytic cracking plant) inoculated in a mineral salt medium was approximately 150 ul after 120 minutes(1). Benthic microorganisms isolated from two types of bottom sediment of eutrophic Lake Jeziorak in Poland were able to utilize shikimic acid as a source of carbon(2).

Carcinogen Classification · 5 items

Shikimic acid

Group 3: Not classifiable as to its carcinogenicity to humans

Volume 40: (1986) Some Naturally Occurring and Synthetic Food Components, Furocoumarins and Ultraviolet Radiation

1987

1987

Safety data

F
3-10
wgk
3
rtecs
GW4600000
hs_code
29181980
Toxicity
LD5 i.p. in mice: 1000 mg/kg (Evans, Osman)
risk_code
36/37/38

Chemistry & industry

Pharmacology

Metabolism/Metabolites · 2 items

SHIKIMIC ACID IS METABOLIZED INTO CYCLOHEXANECARBOXYLIC ACID BY THE INTESTINAL MICROFLORA, BUT THE AROMATIZATION OF CYCLOHEXANECARBOXYLIC ACID OCCURS IN MAMMALIAN TISSUES. IN RATS, THIS ACID IS METABOLIZED AND EXCRETED IN THE URINE MAINLY AS HIPPURIC ACID, TOGETHER WITH 3,4,5,6-TETRAHYDROHIPPURIC ACID & HEXAHYDROHIPPURIC ACID AND SMALL AMT OF BENZOYL & CYCLOHEXYLCARBONYL GLUCURONIDES.

RATS METABOLIZED (14)C-LABELED SHIKIMIC ACID TO HIPPURIC ACID & CATECHOL IN VIVO; RAT CECAL CONTENTS CONVERTED IT TO CYCLOHEXANECARBOXYLIC ACID IN VITRO, THIS CONVERSION BEING ALMOST TOTALLY INHIBITED BY ANTIBIOTICS.

Cellular LocationsCytoplasm

Uses & manufacturing

Uses · 2 items

Active component in the flotation reagent Quebracho; [HSDB] Precursor of the aromatic nucleus of tocopherols synthesized by algae and higher plants; Also a precursor in the biosynthesis of the naphthoquinone ring of vitamin K by plants and bacteria; L-tyrosine, L-phenylalanine, and L-tryptophan are synthesized in nature in the shikimic acid pathway; [Ullmann]

Active component in the flotation reagent Quebracho; depressant for carbonates, fluorite, and non-sulfides

Methods of Manufacturing · 2 items

CHEMICAL SYNTHESIS: SMISSMAN ET AL; J AM CHEM SOC 84: 1040 (1962).

Isolation from the fruit of the oriental plant Illicium religiosum (Seib et Jucc, Magnoliacea: JF Eykman, Rec Trav Chim 4: 32 (1885), idem Ber 24: 1278 (1891); improved synthesis: JL Pawlak, GA Berchtold, J Org Chem 52: 1765 (1987)

Applications · 3 items

DescriptionShikimic acid (3,4,5-trihydroxy-1-cyclohexene-1-carboxylic acid) is a natural organic compound. Plant and microbial sources are the only sources of this compound. The isolation of shikimic acid from the fruit of Illicium religiosum was primarily reported by Ekmann in 1885. The name shikimic acid was derived from the oriental plant shikimi-no-ki in Japanese. It is now available in more quantities through the extraction from the fruit Illicium verum (Chinese star anise). This compound is generally utilized as a starting material for the industrial synthesis of the antiviral oseltamivir, a drug against the H1N1 influenza virus. It is also an essential intermediate in the biosynthesis of lignin, aromatic amino acids (phenylalanine, tyrosine, and tryptophan), and most alkaloids of plants and microorganisms[1]. The neuraminidase inhibitors oseltamivir or Tamiflu derived from the shikimic acid pathway are potent influenza viral neuraminidase inhibitors against most influenza strains ( influenza A and B infections). The mode of application is by mouth, either in the form of a pill or liquid.

UsesShikimic acid has been used as a standard for the quantification of shikimate in apical parts of roots. It has also been used as a substrate in shikimate kinase assay.

UsesNaturally occurring (-)-form is a major biosynthetic precursor of phenylalanine, tyrosine, and tryptophan and hence of the majority of plant alkaloids. It is also involved in the biosynthesis of lignin, flavonpids and other important aromatic compounds.

Suppliers100 total

国药集团化学试剂有限公司86-21-63210123 · [email protected]
北京华美互利生物化工010-56205725 · [email protected]
梯希爱(上海)化成工业发展有限公司021-67121386 · [email protected]
上海阿拉丁生化科技股份有限公司400-6206333 13167063860 · [email protected]
西安天朗源生物科技有限公司17749038280 17749038280 · [email protected]

Additional notes

DefinitionChEBI: A cyclohexenecarboxylic acid that is cyclohex-1-ene-1-carboxylic acid substituted by hydroxy groups at positions 3, 4 and 5 (the 3R,4S,5R stereoisomer). It is an intermediate metabolite in plants and micro rganisms.

Related reactions

3 records

Compound notes

Loading…