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(-)-Loganin

HCID 87691
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Basic information

CAS
18524-94-2
Standard SMILES
COC(=O)C1=CO[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@@H]2[C@@H](C)[C@@H](O)C[C@H]12
InChIKey
AMBQHHVBBHTQBF-UOUCRYGSSA-N
Molecular formula
C17H26O10
Average molar mass
390.4 g/mol
Monoisotopic mass
390.15259702

Overview

Loganin is an iridoid monoterpenoid with formula C17H26O10 that is isolated from several plant species and exhibits neuroprotective and anti-inflammatory properties. It has a role as an EC 3.1.1.7 (acetylcholinesterase) inhibitor, a neuroprotective agent, an anti-inflammatory agent, an EC 3.2.1.20 (alpha-glucosidase) inhibitor, an EC 3.4.23.46 (memapsin 2) inhibitor and a plant metabolite. It is a beta-D-glucoside, a methyl ester, a secondary alcohol, a cyclopentapyran, an iridoid monoterpenoid, an enoate ester and a monosaccharide derivative. It is functionally related to a loganetin.

Names & identifiers

Preferred name
(-)-Loganin
IUPAC
methyl (1S,4aS,6S,7R,7aS)-6-hydroxy-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate
English name
Loganin
Molecular formula
C17H26O10
Molecular weight
390.38

Names & synonyms

Loganin18524-94-2Loganoside(-)-LoganinH7WJ16Q93CCHEBI:15771NSC-606403methyl (1S,4aS,6S,7R,7aS)-6-hydroxy-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylatemethyl (1S,4aS,6S,7R,7aS)-6-hydroxy-7-methyl-1-((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl)oxy-1,4a,5,6,7,7a-hexahydrocyclopenta(c)pyran-4-carboxylateRefChem:41672242-398-0cyclopenta(c)pyran-4-carboxylic acid, 1-(beta-D-glucopyranosyloxy)-1,4a,5,6,7,7a-hexahydro-6-hydroxy-7-methyl-, methyl ester, (1S, 4aS, 6S, 7R, 7aS)-
Show more names
LoganicCuchilosideMethyl 6-hydroxy-7-methyl-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[d]pyran-4-carboxylateMeliatinLoganinlLOGANINENSC 606403
7-Hydroxy-6-desoxyverbenalinMFCD00075645C17H26O10(1S,4aS,6S,7R,7aS)-Methyl 6-hydroxy-7-methyl-1-(((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylatemethyl (1S,4aS,6S,7R,7aS)-6-hydroxy-7-methyl-1-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-1H,4aH,5H,6H,7H,7aH-cyclopenta[c]pyran-4-carboxylateCyclopenta[c]pyran-4-carboxylic acid,1-(b-D-glucopyranosyloxy)-1,4a,5,6,7,7a-hexahydro-6-hydroxy-7-methyl-, methyl ester, (1S,4aS,6S,7R,7aS)-methyl (1S,4aS,6S,7R,7aS)-6-hydroxy-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydropyran-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylatelaganin

Properties

Computed structural properties

XLogP
-1.4
Topological polar surface area
155 Ų
Hydrogen bond donors
5
Hydrogen bond acceptors
10
Rotatable bonds
5
Heavy atoms
27
Formal charge
0
Complexity
580

Experimental & physicochemical properties

LipidsLipids -> Prenol Lipids [PR] -> Isoprenoids [PR01] -> C10 isoprenoids (monoterpenes) [PR0102]
SpringerMaterials PropertiesChemical shift
Collision Cross Section · 2 items

195.65 Ų [M+Na]+ [CCS Type: DT; Method: stepped-field]

194.4 Ų [M+Na]+

Physicochemical properties

Melting point
222 °C · 222°C
alpha
20 · D20 -82.1° (water)
Boiling point
608.8 · 608.8±55.0 °C(Predicted)
Density
1.5 · 1.50±0.1 g/cm3(Predicted)
storage temp.
Sealed in dry,Room Temperature
Water Solubility
Completely soluble in water
solubility
15 mg/ml; · DMF: 15 mg/ml; DMSO: 10 mg/ml; PBS (pH 7.2): 10 mg/ml
form
Solid
pka

Safety & regulation

Safety information is for reference only and does not replace the supplier’s Safety Data Sheet (SDS), applicable regulations, or professional assessment.

GHS classification

GHS ClassificationNot Classified

Hazard information

Hazard Classes and CategoriesNot Classified

Safety data

F
3-10-23
PPE
Eyeshields, Gloves, type N95 (US)
wgk
3
ridadr
1544
hs_code
29389090
risk_code
22
Signal word
Warning
Symbol(GHS)
GHS07
safety_code
22-45-24/25
Storage Class
11 - Combustible Solids
Hazard statements
H315-H319
Precautionary statements
P264-P280-P302+P352-P337+P313-P305+P351+P338-P362+P364-P332+P313

Chemistry & industry

Applications · 1 item

UsesLoganin is an iridoid glycoside that exhibits protective effects against hepatic injury and other diabetic complications associated with abnormal metabolic states and inflammation caused by oxidative stress and advanced glycation endproduct formation.

Additional notes

DefinitionChEBI: An iridoid monoterpenoid isolated from the plant species of the genus Cornus.

Related reactions

1 records
New reaction record
HRID 499965 reaction equation
HRID 499965As reactantuspto-grants-2010_08

Compound notes

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Database identifiers

CAS
18524-94-2
PubChem CID
87691
ChEMBL
CHEMBL1081584
ChEBI
CHEBI:15771
UNII
H7WJ16Q93C
EC Number
242-398-0
Nikkaji
J13.561E
12.8 · 12.80±0.70(Predicted)
color
White to Almost white
λmax
240 nm · 240nm(MeOH)(lit.)
Merck
14 · 14,5560
BRN
55724 · 55724
Major Application
food and beverages
InChIKey
AMBQHHVBBHTQBF-UHFFFAOYSA-N
SMILES
COC(=O)C1=CO[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@@H]3[C@@H](C)[C@@H](O)C[C@H]13
LogP
-2.73 · -2.730 (est)
CAS DataBase Reference
18524 · 18524-94-2(CAS DataBase Reference)
FDA UNII
7 WJ16Q93C · H7WJ16Q93C
UNSPSC Code
85151701 · 85151701
NACRES
24 · NA.24
Symbol(GHS)
7 · GHS07
Signal word
Warning
Hazard statements
315 · H315-H319
Precautionary statements
264 · P264-P280-P302+P352-P337+P313-P305+P351+P338-P362+P364-P332+P313
PPE
95 · Eyeshields, Gloves, type N95 (US)
Risk Statements
22 · 22
Safety Statements
22 · 22-45-24/25
RIDADR
1544 · 1544
WGK Germany
3 · 3
F
3 · 3-10-23
HS Code
29389090 · 29389090
Storage Class
11 · 11 - Combustible Solids