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2-(2-Deoxy-beta-D-erythro-pentofuranosyl)-6-methyl-1,2,4-triazine-3,5(2H,4H)-dione

HCID 96565
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Basic information

CAS
13410-30-5
Standard SMILES
Cc1nn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)[nH]c1=O
InChIKey
LXHOFEUVCQUXRZ-RRKCRQDMSA-N
Molecular formula
C9H13N3O5
Average molar mass
243.22 g/mol
Monoisotopic mass
243.08552052

Overview

6-azathymidine is a N-glycosyl-1,2,4-triazine that is the 6-aza analogue of thymidine. It has a role as a Mycoplasma genitalium metabolite and an antiviral agent. It is a N-glycosyl-1,2,4-triazine and a nucleoside analogue. It is functionally related to a 6-azathymine.

Names & identifiers

Preferred name
2-(2-Deoxy-beta-D-erythro-pentofuranosyl)-6-methyl-1,2,4-triazine-3,5(2H,4H)-dione
IUPAC
2-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-6-methyl-1,2,4-triazine-3,5-dione
English name
5-Methyl-2'-deoxy-6-azauridine
Molecular formula
C9H13N3O5
Molecular weight
243.22

Names & synonyms

6-AzathymidineAzathymidine13410-30-52-(2-Deoxy-beta-D-erythro-pentofuranosyl)-6-methyl-1,2,4-triazine-3,5(2H,4H)-dione2-(2'-Deoxy-D-ribofuranosyl)-6-methyl-as-triazine-3,5(2H,4H)-dioneCHEBI:1315801,2,4-Triazine-3,5(2H,4H)-dione, 2-(2-deoxy-beta-D-erythro-pentofuranosyl)-6-methyl-RefChem:10608592-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-6-methyl-1,2,4-triazine-3,5-dioneBRN 00303802'-deoxy-6-azathymine6-aza-2'-deoxythymine
Show more names
2-(2-Deoxy-β-D-erythro-pentofuranosyl)-6-methyl-1,2,4-triazine-3,5(2H,4H)-dione1,2,4-Triazine-3,5(2H,4H)-dione, 2-(2-deoxy-β-D-erythro-pentofuranosyl)-6-methyl-
2'-deoxy-6-azathymidine6-aza-2'-deoxythymidine4-26-00-00557 (Beilstein Handbook Reference)CHEMBL463659SCHEMBL19848385-Methyl-2'-deoxy-6-azauridineNSC 80211Q27225201

Database identifiers

CAS
13410-30-5
PubChem CID
96565
ChEMBL
CHEMBL463659
ChEBI
CHEBI:131580
Nikkaji
J15.444J

Properties

Computed structural properties

XLogP
-1.3
Topological polar surface area
111 Ų
Hydrogen bond donors
3
Hydrogen bond acceptors
6
Rotatable bonds
2
Heavy atoms
17
Formal charge
0
Complexity
383

Chemistry & industry

Additional notes

DefinitionChEBI: A N-glycosyl-1,2,4-triazine that is the 6-aza analogue of thymidine.

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Compound notes

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