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Variamycin

HCID 99927
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Basic information

CAS
12677-11-1
Standard SMILES
COC(C(=O)C(O)C(C)O)C1Cc2cc3cc(OC4CC(OC5CC(O)C(O)C(C)O5)C(O)C(C)O4)c(C)c(O)c3c(O)c2C(=O)C1OC1CC(OC2CC(OC3CC(O)C(OC)C(C)O3)C(O)C(C)O2)C(O)C(C)O1
InChIKey
NKGFIFLSQXHQOK-UHFFFAOYSA-N
Molecular formula
C52H76O24
Average molar mass
1,085.1 g/mol
Monoisotopic mass
1,084.47265329

Overview

new glycoside antibiotic from aureolic acid group; disrupts RNA synthesis in Staph aureus, HeLa cells; complexes DNA; russian drug

Names & identifiers

Preferred name
Variamycin
IUPAC
3-(3,4-dihydroxy-1-methoxy-2-oxopentyl)-6-[4-(4,5-dihydroxy-6-methyloxan-2-yl)oxy-5-hydroxy-6-methyloxan-2-yl]oxy-8,9-dihydroxy-2-[5-hydroxy-4-[5-hydroxy-4-(4-hydroxy-5-methoxy-6-methyloxan-2-yl)oxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-7-methyl-3,4-dihydro-2H-anthracen-1-one
English name
variamycin
Molecular formula
C52H76O24
Molecular weight
1085.15

Names & synonyms

Variamycin3(C)-Demethyl-4(C)-O-methylmithramycinRefChem:193734Antibiotic 6604-9AMLS002703041SMR001566849VaramycinMithramycin, 3-C-demethyl-4-C-methyl-Variamycin glycoside12677-11-1NSC 269146cid_99927
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Mithramycin Impurity 12D-threo-2-Pentulose, 5-deoxy-1-C-[(2S,3S)-7-[[2,6-dideoxy-3-O-(2,6-dideoxy-β-D-arabino-hexopyranosyl)-β-D-arabino-hexopyranosyl]oxy]-3-[(O-2,6-dideoxy-3-O-methyl-β-D-ribo-hexopyranosyl-(1→3)-O-2,6-dideoxy-β-D-lyxo-hexopyranosyl-(1→3)-2,6-dideoxy-β-D-arabino-hexopyranosyl)oxy]-1,2,3,4-tetrahydro-5,10...
Mithramycin, 3(sup C)-demethyl-4(sup C)-O-methyl-Mithramycin, 3E-demethyl-4E-O-methyl-, (4AR,4DS)-SCHEMBL26458938BDBM115153PD027570

Database identifiers

CAS
12677-11-1
PubChem CID
99927

Properties

Computed structural properties

XLogP
1
Topological polar surface area
347 Ų
Hydrogen bond donors
10
Hydrogen bond acceptors
24
Rotatable bonds
16
Heavy atoms
76
Formal charge
0
Complexity
1,900

Physicochemical properties

Boiling point
1155.7 · 1155.7±65.0 °C(Predicted)
Density
1.47 · 1.47±0.1 g/cm3(Predicted)
pka
4.54 · 4.54±0.60(Predicted)

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Compound notes

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