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Water → N9-(3-Azidopropyl)-2-amino-6-chloropurine

HRID 1695085
Notes
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Reaction equation

HRID 1695085 reaction equation
Cl[CH2:2][CH2:3][CH2:4][N:5]1[CH:13]=[N:12][C:11]2[C:6]1=[N:7][C:8]([NH2:15])=[N:9][C:10]=2[Cl:14].[N-:16]=[N+:17]=[N-:18].[Na+].O>CS(C)=O>[N:16]([CH2:2][CH2:3][CH2:4][N:5]1[CH:13]=[N:12][C:11]2[C:6]1=[N:7][C:8]([NH2:15])=[N:9][C:10]=2[Cl:14])=[N+:17]=[N-:18]
ParticipantsConditionsProcedureWorkupSources & evidenceReaction notes

Participants

5

Reactant 3

HCID 962WaterHCID 33557Sodium AzideHCID 85823850N9-(3-Chloropropyl)-2-amino-6-chloropurine

Product 1

HCID 86067829N9-(3-Azidopropyl)-2-amino-6-chloropurineYield 24.7%

Reagents, catalysts & solvents 1

HCID 679Dimethyl SulfoxideSolvent

Conditions

Temperature
80 °C

Procedure

N9-(3-Chloropropyl)-2-amino-6-chlorpurine (21, 2.56 g, 10.40 mmol) and sodium azide (811 mg, 12.48 mmol) are dissolved in 25 mL DMSO and stirred at 80° C. for 16 h. After cooling to room temperature, the reaction mixture is poured into 150 mL of water and extracted with CH2Cl2. The combined organic phases are washed with water, dried over MgSO4 and evaporated in vacuo. The residue is purified by flash column chromatography (dichloromethane/methanol 50:1 to 10:1) to yield the title compound as a colorless solid (650 mg, 2.57 mmol, 24%). 1H-NMR (400 MHz, DMSO-d6): δ=8.12 (s, 1H, H-8), 6.89 (s, 2H, NH2), 4.10 (t, J=6.8, 2H, CH2), 3.38 (t, J=6.8, 2H, CH2), 2.05 (m, 2H, CH2) ppm. MS (ESI) m/z 253.0 [M+H]+.

Workup

  1. temperatureAfter cooling to room temperature
  2. extractionextracted with CH2Cl2
  3. washThe combined organic phases are washed with water
  4. dry with materialdried over MgSO4
  5. customevaporated in vacuo
  6. customThe residue is purified by flash column chromatography (dichloromethane/methanol 50:1 to 10:1)

Sources & evidence

ORD record
ord-5f2dec05b2c64f169eaf727ba447898c
Source dataset
uspto-grants-2012_04
DOI
10.6084/m9.figshare.5104873.v1
Patent number
US08163479B2

Reaction notes

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On this pageParticipantsConditionsProcedureWorkupSources & evidenceReaction notes