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5-アザ-2'-デオキシシチジン

5-Aza-2'-deoxycytidine

HCID 451668
ノート反応
基本情報概要名称と識別子物性安全と法規制化学と産業関連反応化合物ノート
部分構造検索類似構造を探す

基本情報

CAS
2353-33-5
標準SMILES
Nc1ncn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1
InChIKey
XAUDJQYHKZQPEU-KVQBGUIXSA-N
分子式
C8H12N4O4
平均分子量
228.21 g/mol
単同位体質量
228.08585486

概要

5-aza-2'-deoxycytidine is a fine white crystalline powder. Used as a drug.

名称と識別子

優先名称
5-Aza-2'-deoxycytidine
IUPAC
4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,3,5-triazin-2-one
現地名
5-アザ-2'-デオキシシチジン
英語名
5-Aza-2'-deoxycytidine
分子式
C8H12N4O4
分子量
228.21

名称と別名

Decitabine5-Aza-2'-deoxycytidine2353-33-55-Azadeoxycytidine2'-Deoxy-5-azacytidine5-Aza-deoxycytidine2-Desoxy-5-azacytidineDecitabina5-AZAdCNSC 127716NSC-127716DTXSID7030432
名称をさらに表示
1-(2-デオキシ-β-D-erythro-ペントフラノシル)-4-アミノ-1,3,5-トリアジン-2(1H)-オンデシタビンアザデオキシシチジン5-アザデオキシシチジン4-アミノ-1-(2-デオキシ-β-D-erythro-ペントフラノシル)-1,3,5-トリアジン-2(1H)-オン2'-デオキシ-5-アザシチジン5-アザ-CdR5-アザCdR5-アザ-2'-デオキシシチジン5-アザ-1-(2-デオキシ-β-D-リボフラノシル)シトシン5-アザ-2′-デオキシシチジン5‐アザ‐2′‐デオキシシチジン2′-デオキシ-5-アザシチジン4-アミノ-1-[(2R,4S,5R)-4-ヒドロキシ-5-(ヒドロキシメチル)オキソラン-2-イル]-1,2-ジヒドロ-1,3,5-トリアジン-2-オンDacogen5-AZA-CDR5-AZA-DCCS-1979DecitabinMCE DecitabineAza deoxycytidine
4-Amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-s-triazin-2(1H)-one4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,3,5-triazin-2-one776B62CQ27DTXCID5010432CHEBI:50131INQOVI COMPONENT DECITABINE4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,2-dihydro-1,3,5-triazin-2-one1,3,5-Triazin-2(1H)-one, 4-amino-1-(2-deoxy-beta-D-erythro-pentofuranosyl)-

物性

構造計算による物性

XLogP
-1.2
極性表面積
121 Ų
水素結合供与体数
3
水素結合受容体数
4
回転可能結合数
2
重原子数
16
形式電荷
0
複雑度
356

実験および物理化学的性質

DrugsPharmaceuticals -> Listed in ZINC15
Solubility5.50e+00 g/L
Human Drugs · 4 件

Breast Feeding; Lactation; Milk, Human; Antimetabolites; Antineoplastic Agents; Enzyme Inhibitors

FDA approved drugs -> Active ingredient

EMA approved medicines: Human medicine

FDA approved drugs -> Active ingredient

Melting Point193-196
Physical Description · 2 件

5-aza-2'-deoxycytidine is a fine white crystalline powder. Used as a drug.

Solid

物理化学的性質

融点
200 °C · ~200 °C (dec.)
比旋光度
22 · D22 +68.5° (30 min) +57.8° (6 hr) (c = 0.5 in water)
沸点
370.01 °C · 370.01°C (rough estimate)
比重(密度)
1.3771 · 1.3771 (rough estimate)
屈折率
1.659 · 1.6590 (estimate)
貯蔵温度
-20 °C · Keep in dark place,Inert atmosphere,Store in freezer, under -20°C
溶解性
酢酸/水 (1:1): 50 mg/mL

安全と法規制

安全情報は参考情報です。供給元の安全データシート(SDS)、適用法令、専門家による評価に代わるものではありません。

GHS分類

GHS Classification · 4 件

Danger

H302 (91.5%): Harmful if swallowed [Warning Acute toxicity, oral]

P203, P261, P264, P264+P265, P270, P271, P280, P301+P317, P302+P352, P304+P340, P305+P351+P338, P318, P319, P321, P330, P332+P317, P337+P317, P362+P364, P403+P233, P405, and P501 (click each P-code to see the statement)

Aggregated GHS information provided per 47 reports by companies from 8 notifications to the ECHA C&L Inventory. Each notification may be associated with multiple companies.

危険有害性情報

Fire HazardsFlash point data for this chemical are not available. It is probably combustible. (NTP, 1992)
Reactive GroupAlcohols and Polyols
Reactivity Profile · 1 件

5-AZA-2'-DEOXYCYTIDINE is an organic compound with both amine and alcohol substituents. Amines are chemical bases. They neutralize acids to form salts plus water. These acid-base reactions are exothermic. The amount of heat that is evolved per mole of amine in a neutralization is largely independent of the strength of the amine as a base. Amines may be incompatible with isocyanates, halogenated organics, peroxides, phenols (acidic), epoxides, anhydrides, and acid halides. Flammable gaseous hydrogen is generated by amines in combination with strong reducing agents, such as hydrides.

Air and Water Reactions · 1 件

Probably light and air sensitive. Water soluble. Decomposes in aqueous solution at a rate that depends on pH: at pH 7 the drug is more stable than at pH 9, but is less stable than at pH 6. At pH 7 and 99 °F, approximately 7% conversion occurs in 1 hour (NTP, 1992).

Hazard Classes and CategoriesAcute Tox. 4 (91.5%)

安全と保護具

化学と産業

薬理情報

ATC Code · 3 件

L01BC08

L - Antineoplastic and immunomodulating agents

QL - Antineoplastic and immunomodulating agents

Protein BindingDecitabine exhibits negligible (< 1%) plasma protein binding.
Pharmacodynamics · 1 件

Decitabine is a prodrug analogue of the natural nucleotide 2’-deoxycytidine, which, upon being phosphorylated intracellularly, is incorporated into DNA and exerts numerous effects on gene expression. The use of decitabine is associated with neutropenia and thrombocytopenia. In addition, decitabine can cause fetal harm in pregnant women; effective contraception and avoidance of pregnancy are recommended during treatment with decitabine.

Mechanism of Action · 1 件

Myelodysplastic syndromes (MDS) are a group of hematopoietic neoplasms that manifest in peripheral cytopenias and may eventually progress to secondary acute myeloid leukemia (sAML). Included in the over 45 genes commonly mutated in MDS patients are those involved in DNA methylation and histone modification, and it is well-established that alteration of the epigenetic landscape is a feature of myeloid leukemias. Decitabine is considered a prodrug, as it requires transport into cells and subsequent phosphorylation by distinct kinases to generate the active molecule 5-aza-2'-deoxycytidine-triphosphate, which is incorporated by DNA polymerase during DNA replication. Once incorporated into DNA, decitabine is recognized as a substrate by DNA methyltransferase enzymes (DNMTs), specifically DNMT1, but due to the presence of an N5 rather than C5 atom, traps the DNMT through the irreversible formation of a covalent bond. At low concentrations, this mode of action depletes DNMTs and results in global DNA hypomethylation while at high concentrations, it additionally results in double-strand breaks and cell death. The general hypothesis regarding decitabine's therapeutic efficacy is that the global hypomethylation it induces results in the expression of previously silent tumour suppressor genes. However, there are other putative mechanisms also related to this change in DNA methylation, including indirect alteration of transcription through effects on transcription factors, indirectly altering histone modifications and chromatin structure, and activating pathways involved in DNA damage response. The overall effect of decitabine is a decrease in neoplastic cell proliferation and an increase in the expression of tumour suppressor genes.

関連反応

5 件
反応記録を作成
HRID 500343 の反応式
HRID 500343反応物としてuspto-grants-2010_08
HRID 1510806 の反応式
HRID 1510806生成物としてuspto-grants-2012_07
HRID 1777284 の反応式
HRID 1777284生成物としてuspto-grants-2016_02
HRID 1988570 の反応式
HRID 1988570反応物としてuspto-grants-2010_01
HRID 2043793 の反応式
HRID 2043793生成物としてuspto-grants-2013_11

化合物ノート

読み込み中…

このページの内容基本情報概要名称と識別子物性安全と法規制化学と産業関連反応化合物ノート

データベース識別子

CAS
2353-33-5
PubChem CID
451668
DTXSID
DTXSID7030432
ChEMBL
CHEMBL1201129
ChEBI
CHEBI:50131
UNII
776B62CQ27
EC Number
219-089-4
Nikkaji
J91.053H
外見
粉
酸解離定数(Pka)
14.02 · 14.02±0.60(Predicted)
色
ホワイトからオフホワイト
Merck
14 · 14,2853
BRN
617982 · 617982
安定性
安定。光や空気に敏感な場合があります。強力な酸化剤とは相容れない。
InChI
1S/C8H12N4O4/c9-7-10-3-12(8(15)11-7)6-1-4(14)5(2-13)16-6/h3-6,13-14H,1-2H2,(H2,9,11,15)/t4-,5+,6+/m0/s1
InChIKey
XAUDJQYHKZQPEU-KVQBGUIXSA-N
SMILES
NC1=NC(=O)N(C=N1)[C@H]2C[C@H](O)[C@@H](CO)O2
CAS データベース
2353 · 2353-33-5(CAS DataBase Reference)
EPAの化学物質情報
5 · 5-Aza-2'-deoxycytidine (2353-33-5)

化学的性質

化学的特性white crystalline powder

Fire FightingFires involving this material can be controlled with a dry chemical, carbon dioxide or Halon extinguisher. (NTP, 1992)
First Aid · 1 件

EYES: First check the victim for contact lenses and remove if present. Flush victim's eyes with water or normal saline solution for 20 to 30 minutes while simultaneously calling a hospital or poison control center. Do not put any ointments, oils, or medication in the victim's eyes without specific instructions from a physician. IMMEDIATELY transport the victim after flushing eyes to a hospital even if no symptoms (such as redness or irritation) develop.

Nonfire Spill Response · 1 件

SMALL SPILLS AND LEAKAGE: If you spill this chemical, you should dampen the solid spill material with water, then transfer the dampened material to a suitable container. Use absorbent paper dampened with water to pick up any remaining material. Seal your contaminated clothing and the absorbent paper in a vapor-tight plastic bag for eventual disposal. Wash all contaminated surfaces with a soap and water solution. Do not reenter the contaminated area until the Safety Officer (or other responsible person) has verified that the area has been properly cleaned.

Personal Protective Equipment (PPE) · 1 件

RECOMMENDED RESPIRATOR: Where the neat test chemical is weighed and diluted, wear a NIOSH-approved half face respirator equipped with a combination filter cartridge, i.e. organic vapor/acid gas/HEPA (specific for organic vapors, HCl, acid gas, SO2 and a high efficiency particulate filter). (NTP, 1992)

毒性情報

Hepatotoxicity · 1 件

In early clinical trials using high doses of decitabine, serum enzyme elevations occurred in up to 16% of patients with underlying liver disease or liver metastases, but rarely in persons without hepatic illness. In subsequent studies, serum ALT elevations were reported in 5% to 15% of treated patients, but all were self-limited and no clinically apparent liver injury was reported. Recent studies have reported elevations in serum bilirubin levels in 7% to 12% of treated patients, but the elevations resolved rapidly and were not associated with other clinical or laboratory evidence of liver injury. Monitoring of serum enzyme levels during treatment is recommended only in patients with concurrent liver disease.

Drug Induced Liver Injury · 6 件

Drug Induced Liver Injury Rank (DILIrank 2.0)

Decitabine

Ambiguous-DILI-concern

4

Adverse reactions

DOI:10.1016/j.drudis.2016.02.015

Effects During Pregnancy and Lactation◉ Summary of Use during Lactation

安全データ

F
10-34
wgk
3
rtecs
XZ3012000
毒性
LD50 in mice (mg/kg): 190 i.p. (Momparler, 1985)
hs_code
29349990
risk_code
22-36/37/38-68-61
hazard_code
Xn,Xi,T
safety_code
26-36-36/37
Hazard Classifications
Acute Tox. 4 OralEye Irrit. 2Muta. 2Repr. 1BSkin Irrit. 2STOT SE 3
ストレージクラス
6.1C - Combustible acute toxic Cat.3toxic compounds or compounds which causing chronic effects
Biological Half-Life · 1 件

Decitabine has a half-life of 0.62 hours (49% CV) when administered intravenously at 15 mg/m<sup>2</sup> for three hours every eight hours over three days, and a half-life of 0.54 hours (43% CV) at 20 mg/m<sup>2</sup> for one hour once daily over five days.

Metabolism/Metabolites · 1 件

Decitabine is phosphorylated inside cells by the sequential action of deoxycytidine kinase, nucleotide monophosphate kinase, and nucleotide diphosphate kinase, prior to being incorporated into newly synthesized DNA by DNA polymerase. Decitabine not incorporated into cellular DNA undergoes deamination by cytidine deaminase followed by additional degradation prior to excretion.

FDA Pharmacological Classification · 6 件

776B62CQ27

DECITABINE

Mechanisms of Action [MoA] - Nucleic Acid Synthesis Inhibitors

Established Pharmacologic Class [EPC] - Nucleoside Metabolic Inhibitor

Decitabine is a Nucleoside Metabolic Inhibitor. The mechanism of action of decitabine is as a Nucleic Acid Synthesis Inhibitor.

DECITABINE

MeSH Pharmacological Classification · 2 件

Antimetabolites that are useful in cancer chemotherapy.

Compounds or agents that combine with an enzyme in such a manner as to prevent the normal substrate-enzyme combination and the catalytic reaction.

Absorption, Distribution and Excretion · 4 件

Decitabine administered intravenously at 15 mg/m2 for three hours every eight hours over three days resulted in a Cmax of 73.8 ng/mL (66% coefficient of variation, CV), an AUC0-∞ of 163 ng\*h/mL (62% CV), and a cumulative AUC of 1332 ng\*h/mL (95% CI of 1010-1730). Similarly, decitabine at 20 mg/m2 for one hour once daily over five days resulted in a Cmax of 147 ng/mL (49% CV), an AUC0-∞ of 115 ng\*h/mL (43% CV), and a cumulative AUC of 570 ng\*h/mL (95% CI of 470-700).

Less than 1% of administered decitabine is excreted in the urine.

Decitabine as an apparent volume of distribution of 4.59 ± 1.42 L/kg.

Decitabine has a clearance of 125 L/hr/m<sup>2</sup> (53% CV) when administered intravenously at 15 mg/m<sup>2</sup> for three hours every eight hours over three days, and a clearance of 210 L/hr/m<sup>2</sup> (47% CV) at 20 mg/m<sup>2</sup> for one hour once daily over five days.

Cellular LocationsCytoplasm
応用分野 · 3 件

説明Decitabine, 5-aza-2’-deoxycytidine, has been launched for the treatment of myelodysplastic syndromes (MDS). MDS are a set of hematologic disorders affecting the bone marrow that result in ineffective formation and development of blood cells. Furthermore, patients with MDS have a high risk of progressing to acute myeloid leukemia (AML). Traditional treatments include blood transfusions, hematopoietic growth factors, and prophylactic antibiotics, but these measures merely improve the quality of life with questionable effects on disease modification. While stem-cell transplantation is an aggressive, potentially curative approach, the advanced age or the other complicating health issues of most patients preclude them from considering this option. Recent advances in the underlying etiology of MDS, however, have led to the development of a new class of compounds known as ‘‘demethylating agents’’. Decitabine follows the successful introduction of the first DNA methyltransferase inhibitor azacitidine.

使用Used as cancer treatment, in particular to inhibit the growth of pancreatic endocrine tumor cell lines.

一般的な説明Fine white crystalline powder. Used as a drug.

上流・下流製品情報

上流原料

N-(Trimethylsilyl)-4-[(trimethylsilyl)oxy]-2-amine-1,3,5-triazin3',5'-di-o-p-chlorobenzoyl-2-deoxy-5-azacytosineD-erythro-Pentofuranosyl chloride, 2-deoxy-1,1'-ビ-2-ナフトールトリエチルアミンN,N-ジメチルホルムアミド硝酸コバルト 六水和物

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