Acetonitrile → 4-amino-5-fluoro-N-methyl-2-oxo-N-phenylpyrimidine-1(2H)-carbothioamide

HRID 1038952Notes

Reaction equation

HRID 1038952 reaction equation
[NH2:1][C:2]1[C:7]([F:8])=[CH:6][N:5]=[C:4]([OH:9])[N:3]=1.CC#N.[CH3:13][N:14]([C:18]1[CH:23]=[CH:22][CH:21]=[CH:20][CH:19]=1)[C:15](Cl)=[S:16]>C(Cl)Cl>[NH2:1][C:2]1[C:7]([F:8])=[CH:6][N:5]([C:15](=[S:16])[N:14]([CH3:13])[C:18]2[CH:23]=[CH:22][CH:21]=[CH:20][CH:19]=2)[C:4](=[O:9])[N:3]=1

Participants

5

Conditions

Temperature
65 °C

Procedure

A 25 mL screw-top vial was charged with 4-amino-5-fluoropyrimidin-2-ol (100.1 mg, 0.775 mmol), CH3CN (3 mL) and BSA (0.284 mL, 1.162 mmol). The resulting mixture was then agitated on a rotary shaker at 65° C. for 90 min. After cooling to room temperature, methyl(phenyl)carbamothioic chloride (157.6 mg, 0.849 mmol) was added, and the reaction mixture was agitated on a rotary shaker at 65° C. for 16 h. After cooling to room temperature, the reaction mixture was diluted with CH2Cl2 (100 mL) and washed with satd aq NaCl solution (50 mL×2). The organic layer was then dried over Na2SO4, filtered, and concentrated in vacuo to afford a green oil. This crude material was then purified by normal phase chromatography (gradient, 0 to 35% MeOH/CH2Cl2) to provide 4-amino-5-fluoro-N-methyl-2-oxo-N-phenylpyrimidine-1(2H)-carbothioamide (80.1 mg, 37%) as a 90% pure beige/green solid: mp 192-196° C.; 1H NMR (400 MHz, DMSO-d6) δ 8.16 (d, J=6.7 Hz, 1H), 7.83 (s, 1H), 7.66 (s, 1H), 7.38 (m, 2H), 7.34-7.26 (m, 3H), 3.71 (s, 3H); ESIMS m/z 279 ([M+H]+).

Workup

  1. temperatureAfter cooling to room temperature
  2. stirringthe reaction mixture was agitated on a rotary shaker at 65° C. for 16 h
  3. temperatureAfter cooling to room temperature
  4. washwashed with satd aq NaCl solution (50 mL×2)
  5. dry with materialThe organic layer was then dried over Na2SO4
  6. filtrationfiltered
  7. concentrationconcentrated in vacuo
  8. customto afford a green oil
  9. customThis crude material was then purified by normal phase chromatography (gradient, 0 to 35% MeOH/CH2Cl2)

Sources & evidence

ORD record
ord-7b45416790d54dada1ec56ac9e9560cf
Source dataset
uspto-grants-2013_10
Patent number
US08552020B2

Reaction notes

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