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HuagongsheHuagongshe Chemistry Print Report · For research reference only
HRID 1275395Generated: November 3, 2026

Methanol → 5'-O-(4,4'-Dimethoxytrityl)thymidine

https://huagongshe.com/reaction/1275395

Reaction equation

Participants

RoleNameHCIDCharge
ReactantMethanolHCID 887—
ReactantThymidineHCID 5789—
ReactantTriethylamineHCID 8471—
Reactant1,1'-(Chlorophenylmethylene)bis(4-methoxybenzene)HCID 96831—
SolventTetrahydrofuranHCID 8028—
Product5'-O-(4,4'-Dimethoxytrityl)thymidineHCID 16241985.3%

Reaction Steps

Triethylamine (10 ml) in 200 ml THF was injected into a solid mixture of 6.8 g (28.0 mmol) thymidine and 10.2 g (28.6 mmol) 4,4'-dimethoxytrityl chloride under nitrogen with stirring. The solution was stirred at room temperature for 2 hours. After completion of the reaction, 10 ml methanol was added to consume the excess DMTrCl. The mixture was stirred for 5 minutes and the solvent removed by rotary evaporation. The residue was dissolved in 250 ml of ethyl acetate and the solution was washed with saturated NaHCO3 and dried over MgSO4. The solid was recrystallized from ethyl acetate/hexane to obtain 13.0 g 5'-protected thymidine 16 (85.6%).: m.p. 124-126° C.; 1H NMR (200 MHz, CDCl3) δ 8.97 (s, 1H, NH), 7.60 (m, 1H, H-6), 6.72-7.42 (m, 13H, Ph), 6.42 (m, 1H, H-1'), 4.56 (m, 1H, H-3'), 4.05 (m, 1H, H-4'), 3.78 (s, 6H, OMe2), 3.41 (m, 2H, H-5'), 2.62 (m, 1H, OH), 2.46 (m, 2H, H-2'), 1.46 (s, 3H, Me); 13C NMR (50 MHz, CDCl3) δ 163.0 (C-4), 157.6, 149.8 (C-2), 143.5, 135.0 (C-6), 134.7, 134.6, 129.4, 127.4, 127.3, 126.5, 112.8, 110.9 (C-5), 86.7 (C-4'), 86.2, 84.7 (C-1'), 72.5 (C-3'), 63.8 (C-5'), 55.5 (OCH3), 41.3 (C-2'), 12.5 (CH3).

Provenance & Evidence

DOI10.6084/m9.figshare.5104873.v1
Patent numberUS06160109
Source datasetuspto-grants-2000_12
ORD IDord-402eacbe0d06465c96d9c42e22bd16ca
Source noteuspto-grants-2000_12