Participants
| Role | Name | HCID | Charge |
|---|
| Reactant | Phenol | HCID 996 | — |
| Reactant | Nitrofungin | HCID 12074 | — |
| Reactant | Mops | HCID 70807 | — |
| Reactant | Alpha-Ketoglutarate | HCID 164533 | — |
| Reactant | Sodium Ascorbate | HCID 23667548 | — |
| Reactant | HCID 57371537 | HCID 57371537 | — |
| Solvent | Dimethyl Sulfoxide | HCID 679 | — |
| Product | 4-Nitrophenol | HCID 980 | — |
Reaction Steps
A convenient assay of AAD-13 was devised using 2-(2-chloro,4-nitrophenoxy)propionate (CNPP) as substrate. Cleavage of CNPP by AAD-13 will release 2-chloro,4-nitrophenol. This phenol has a bright yellow absorbance at 410 nm at pH 7 enabling the reaction to be followed continuously or by endpoint analysis. The presence of AAD-13 activity can be monitored visually without the need for addition of further reagents. Microplate-based spectrophotometric assays were performed in a total volume of 0.2 ml 20 mM MOPS pH 6.75 containing 200 μM NH4FeSO4, 200 μM sodium ascorbate, 1 mM α-ketoglutarate, the appropriate amount of CNPP (added from a 10 mM stock made up in DMSO), and enzyme. Assays are initiated by addition of CNPP, enzyme, or α-ketoglutarate at time zero and the increase in absorbance followed for 10 min at 410 nm in a microplate reader. The first 2 min of the reaction will be used to determine initial rates. A calibration curve performed under standard assay conditions (200 μl final assay volume) indicated that an absorbance at 410 nm of 0.1 was obtained from 25.1 μM 2-chloro, 4-nitrophenol. Using this assay, the kinetic constants for CNPP as a substrate were determined to be Km=31±5.5 μM and kcat=16.2±0.79 min−1.
Provenance & Evidence
| DOI | 10.6084/m9.figshare.5104873.v1 |
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| Patent number | US08278505B2 |
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| Source dataset | uspto-grants-2012_10 |
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| ORD ID | ord-2436d87143a54e778ee900ce930bfee9 |
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| Source note | uspto-grants-2012_10 |
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