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HuagongsheHuagongshe Chemistry Print Report · For research reference only
HRID 2169630Generated: November 1, 2026

Sodium Bicarbonate → 2-(1H-pyrrolo[2,3-b]pyridin-3-yl)-5,6,6a,7,9,10-hexahydro-[1,4]oxazino[3,4-h]pteridine

https://huagongshe.com/reaction/2169630

Reaction equation

Participants

RoleNameHCIDCharge
ReactantSodium BicarbonateHCID 516892—
Reactanttert-Butyl 3-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrrolo[2,3-b]pyridine-1-carboxylateHCID 53217196—
ReactantHCID 86670087HCID 86670087—
CatalystBis(cyclopenta-1,4-dien-1-yl(diphenyl)phosphane);dichloropalladium;iron(2+)HCID 178418228—
Solvent1,4-DioxaneHCID 31275—
Product2-(1H-pyrrolo[2,3-b]pyridin-3-yl)-5,6,6a,7,9,10-hexahydro-[1,4]oxazino[3,4-h]pteridineHCID 6019675915%

Reaction Conditions

Temperature100 °C

Reaction Steps

A mixture of 2-chloro-5,6,6a,7,9,10-hexahydro-[1,4]oxazino[3,4-h]pteridine (PREPARATION x2, 50 mg, 0.221 mmol), tert-butyl 3-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrrolo[2,3-b]pyridine-1-carboxylate (114 mg, 0.331 mmol) and PdCl2(dppf) (8.07 mg, 0.011 mmol) were partially dissolved in dioxane (2 mL) and aqueous saturated NaHCO3 (0.4 mL). The resulting brown suspension was stirred overnight at 100° C. By the following day, the coupling reaction was complete and the BOC group had also been removed. The reaction mixture was subsequently diluted with ethyl acetate and washed with brine (3×10 mL). The combined organic layers were dried over MgSO4, filtered, and concentrated in vacuo. The product was first purified by LC/MS using a gradient of 0-30% CH3CN (with 0.035% TFA) in H2O (with 0.05% TFA). The product and the starting material co-eluted, yielding no pure fractions. The fractions which contained product were concentrated and lyophilized to give a yellow solid, which was re-purified via LC/MS using a 15-40% gradient of CH3CN in H2O with 10 mmol NH4HCO3. The pure fractions were combined and lyophilized to give the title compound as a white solid (10 mg, 15%). 1H NMR (400 MHz, DMSO-d6) δ 2.89-3.08 (m, 2 H), 3.12-3.26 (m, 1 H), 3.39-3.52 (m, 2 H), 3.52-3.67 (m, 1 H), 3.83-4.14 (m, 2 H), 4.45-4.63 (m, 1 H), 5.60-5.80 (m, 1 H), 7.04-7.23 (m, 1 H), 7.53-7.68 (m, 1 H), 7.91-8.03 (m, 1 H), 8.13-8.30 (m, 1 H), 8.59-8.78 (m, 1 H), 11.70-11.88 (m, 1 H). ESI-MS m/z [M+H]+ calc'd for C16H16N6O, 309.14; found 309.3.

Provenance & Evidence

DOI10.6084/m9.figshare.5104873.v1
Patent numberUS09045496B2
Source datasetuspto-grants-2015_06
ORD IDord-1cb52b2974634f1894fb1c6bcecdd9aa
Source noteuspto-grants-2015_06