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HuagongsheHuagongshe Chemistry Print Report · For research reference only
HRID 37396Generated: October 28, 2026

Dichloroacetic Acid → N6-Benzoyl-5'-O-(t-butyldimethylsilyl)-2',3'-dideoxy-2'-oxoadenosine

https://huagongshe.com/reaction/37396

Reaction equation

Participants

RoleNameHCIDCharge
ReactantDichloroacetic AcidHCID 6597—
Reactant1,3-Propanediamine, N'-(ethylcarbonimidoyl)-N,N-dimethyl-, monohydrochlorideHCID 2723939—
ReactantN6-benzoyl-5'-O-(t-butyldimethylsilyl)-3'-deoxyadenosineHCID 11178870—
SolventBenzeneHCID 241—
SolventDimethyl SulfoxideHCID 679—
SolventDichloromethaneHCID 6344—
ProductN6-Benzoyl-5'-O-(t-butyldimethylsilyl)-2',3'-dideoxy-2'-oxoadenosineHCID 1419224679.4%

Reaction Steps

To a stirred solution of 2.0 g (5.47 mmol) 5'-O-(t-butyldimethylsilyl)-3'-deoxyadenosine, the product of Example 13, in 11 mL of pyridine at room temperature was added 2.5 mL (21.9 mmol) of benzoyl chloride. After 2 h, 1 mL of methanol was added, the reaction mixture was diluted with ether, washed successively with water and 50% saturated aqueous sodium bicarbonated, and dried over magnesium sulfate. The organic phase was evaporated under reduced pressure and then coevaporated with several portions of n-heptane to afford 3.9 g of a foam. To a stirred solution of 3.8 g of this residue in 44 ml of dioxane were added 16.8 mL of 1N aqueous NaOH. After 2 hours 5.6 mL additional 1N aqueous NaOH were added, After a total of 2.5 hours, the reaction mixture was neutralized with acetic acid, diluted with EtOAc, washed successively with water and saturated aqueous NaCl, dried over magnesium sulfate, and then concentrated under reduced pressure. Chromatography of the residue on silica gel with a 100:0 to 95:5 EtOAc/MeOH gradient afforded 1.94 g (75%) of N6-benzoyl-5'-O-(t-butyldimethylsilyl)-3'-deoxyadenosine. To a stirred solution of 880 mg (1.87 mmol) of N6-benzoyl-5'-O-(t-butyldimethylsilyl)-3'-deoxyadenosine in 9 mL of DMSO and 9 mL of benzene at room temperature containing 1.80 g (9.37 mmol) of 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride were added 4 portions of 0.031 mL (0.37 mmol) of dichloroacetic acid at 15 minute intervals. Fifteen minutes after the final addition, the reaction mixture was diluted with dichloromethane and washed with water adjusted to pH 3 with 1N aqueous HCl. The aqueous phase was extracted several times with dichloromethane, the combined organic extracts dried over magnesium sulfate, and then concentrated under reduced pressure. Chromatography of the residue on silica gel with a 75:25 to 100:0 EtOAc/hexane gradient afforded 694 mg (79%) of the title compound: Colorless glass. Rf =0.40 (SG, EtOAc); [α]D23 -17.0° (c 1.25, CHCl3); IR (CDCl3) 3415, 2960, 2935, 2860, 1775, 1710, 1610, 1590, 1455, 1255, 1240, 1070 cm-1 ; 1H-NMR (300 MHz, CDCl3, TMS=0.00 ppm) δ0.05, 0.07 (2s, 6H, (CH3)2Si), 0.90 (s, 9H, (CH3)3CSi), 2.86 (dd, 1H, J=19.0 Hz, J'=7.5 Hz, 3'-H), 3.16 (dd, 1H, J=19.0 Hz, J'=7.5 Hz, 3'-H), 3.88 (dd, 1H, J=11.5 Hz, J'=4.0 Hz, 5'-H), 4.02 (dd, 1H, J=11.5 Hz, J'=3.5 Hz, 5'-H), 4.66 (dddd, 1H, J=J'=7.5 Hz, J"=4.0 Hz, J' "=3.5 Hz, 4'-H), 6.06, (s, 1H, 1'-H), 7.52 (m, 2H, m-C6H5), 7.61 (m, 1H, p-C6H5), 8.02 (m, 2H, o-C6H5), 8.11, 8.78 (2s, 2H, 2-H, 8-H), 9.03 (bs, 1H, NH) DCI/NH3MS, m/z 468 (M+H)+, 240; exact mass calcd for C23H30N5O4Si (M+H)+ : 468.2067, found: 468.2067.

Provenance & Evidence

DOI10.6084/m9.figshare.5104873.v1
Patent numberUS05420276
Source datasetuspto-grants-1995_05
ORD IDord-6348f0765eba42cf919d126959f47995
Source noteuspto-grants-1995_05