Participants
| Role | Name | HCID | Charge |
|---|
| Reactant | 5'-Atp | HCID 5957 | — |
| Reactant | Coenzyme A | HCID 87642 | — |
| Reactant | Magnesium Chloride | HCID 5360315 | — |
| Reactant | (R)-3-hydroxyoctanoate | HCID 86308678 | — |
| Solvent | Tromethamine hydrochloride | HCID 93573 | — |
| Product | (R)-3-hydroxyoctanoyl-CoA | HCID 11966193 | — |
Reaction Steps
(R)-3-hydroxyoctanoyl-CoA was synthesized according to Rehm B. H. A., Kruger N., Steinbuchel A., Journal of Biological Chemistry, 273, p. 24044-24051, 1998 with slight changes as described below. Acyl-CoA synthetic enzyme (available from Sigma Co.) was dissolved in a Tris-HCl buffer (50 mM, pH 7.5) containing 2 mM ATP, 5 mM MgCl2, 2 mM coenzyme A, and 2 mM (R)-3-hydroxyoctanoate to concentration of 0.1 mU/μl. The mixture was retained in a warm bath at 37° C. and was sampled suitably to analyze progress of a reaction by HPLC. After the enzyme reaction was terminated by adding sulfuric acid to the sampled reaction solution to concentration of 0.02 N, the unreacted substrate (R)-3-hydroxyoctanoate was removed by extraction with n-heptane. The HPLC analysis employed RP18 column (nucleosil C18, 7 μm, Knauser), and elusion was conducted under a linear concentration slope of acetonitrile, using a 25 mM phosphoric acid buffer (pH 5.3) as a moving phase. A thioester compound produced through the enzymatic reaction was detected by monitoring an absorption spectrum of 200 to 500 nm using a diode array detector. (R)-3-hydroxy-5-phenylvaleryl CoA and (R)-3-hydroxy-5-(4-fluorophenyl)valeryl CoA were synthesized in a similar manner.
Provenance & Evidence
| DOI | 10.6084/m9.figshare.5104873.v1 |
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| Patent number | US07527809B2 |
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| Source dataset | uspto-grants-2009_05 |
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| ORD ID | ord-445dc61e1b1b4b809f0bf94b3b6c9479 |
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| Source note | uspto-grants-2009_05 |
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