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HuagongsheHuagongshe Chemistry Print Report · For research reference only
HRID 552207Generated: October 31, 2026

Formaldehyde → 4-methyl-morpholine-3(S)-carboxylic acid (6-chloro-9H-beta-carbolin-8-yl)-amide

https://huagongshe.com/reaction/552207

Reaction equation

Participants

RoleNameHCIDCharge
ReactantFormaldehydeHCID 712—
Reactant1-Ethyl-3-(3'-dimethylaminopropyl)carbodiimideHCID 15908—
Reactant(S)-morpholine-3-carboxylic acidHCID 1501894—
Reactant6-Chloro-9H-beta-carbolin-8-amineHCID 21362701—
ReactantHCID 178418361HCID 178418361—
CatalystPalladium hydroxideHCID 9942167—
SolventEthanolHCID 702—
SolventWaterHCID 962—
SolventPyridineHCID 1049—
SolventEthyl AcetateHCID 8857—
Product4-methyl-morpholine-3(S)-carboxylic acid (6-chloro-9H-beta-carbolin-8-yl)-amideHCID 1122165154.5%

Reaction Steps

A slurry of morpholine-3(S)-carboxylic acid (3.00 g, 22.9 mmol) in EtOH (115 ml) was stirred at RT. A solution of aqueous CH2O (3.42 ml, 45.8 mmol, 37% w/w in H2O) was added, followed by Pd(OH)2 (600 mg, 20% w/w on charcoal). The flask was charged with hydrogen (1 atm) and the grey slurry was stirred for 24 hr at RT under a balloon of hydrogen. The flask was purged with nitrogen and the black slurry was diluted with MeOH, filtered through filter paper and concentrated to a reduced volume. The pale grey solution was filtered through a 0.45 μm syringe filter to remove residual Pd(OH)2 and concentrated to yield a clear colorless oil. The oil was placed under high vacuum for 24 hr and a white, solid foam was isolated. The foam was dissolved in pyridine (200 ml) and 6-chloro-9H-β-carbolin-8-ylamine (3.74 g, 17.2 mmol) was added, followed by EDCI (5.87 g, 30.6 mmol). The clear pale orange solution was stirred at RT for 24 hr. The solution was diluted with H2O (300 ml) and poured into a separatory funnel containing EtOAc (300 ml). The mixture was shaken and the layers were separated. The aqueous layer was extracted with EtOAc (3×150 ml) and the combined organic layers were washed with H2O and brine. The organic layer was dried, filtered and concentrated to yield a brown oil which was placed under high vacuum. The resulting brown foam was triturated with MeOH and the precipitate which formed was filtered and washed with MeOH. The resulting pale yellow solid was purified via chiral HPLC to yield a white solid (3.23 g). 1H-NMR (300 MHz, DMSO-d6): δ 11.36 (s, 1); 10.02 (s, 1); 9.04 (s, 1); 8.38 (d, 1); 8.22-8.21 (m, 1); 8.15 (d, 1); 7.91-7.90 (m, 1); 4.00 (dd, 1); 3.85-3.81 (m, 1); 3.69-3.58 (m, 2); 2.99-2.95 (dd, 1); 2.89-2.85 (m, 1); 2.32 (s, 3); 2.32-2.24 (m, 1). NH4OAc standard conditions. DAD Rf=1.89 min. M+H=345. Chiral preparative HPLC: 10% v/v EtOH/Hexanes. Chiralcel OD column. Rf=11.5-14 min. Enantiopurity of product≧99% ee.

Provenance & Evidence

DOI10.6084/m9.figshare.5104873.v1
Patent numberUS07951801B2
Source datasetuspto-grants-2011_05
ORD IDord-01fd0ba568d2492594ec7ebd3747c9ec
Source noteuspto-grants-2011_05