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HuagongsheHuagongshe Chemistry Print Report · For research reference only
HRID 604235Generated: October 27, 2026

2-(6-Hydroxy-3-oxo-3H-xanthen-9-yl)benzoic acid → 5-Fam

https://huagongshe.com/reaction/604235

Reaction equation

Participants

RoleNameHCIDCharge
Reactant2-(6-Hydroxy-3-oxo-3H-xanthen-9-yl)benzoic acidHCID 3383—
ReactantL-LysineHCID 5962—
ReactantHydrazineHCID 9321—
ReactantFluorescein 5-isothiocyanateHCID 18730—
ReactantDiisopropylethylamineHCID 81531—
SolventDimethylformamideHCID 6228—
Product5-FamHCID 123755—

Reaction Steps

Peptide-resin obtained via from Method 5, containing an ivDde protecting group on the epsilon nitrogen of lysine, was mixed with a solution of hydrazine in DMF (10% hydrazine/DMF, 2×10 mL, 10 min) to remove the ivDde group. The epsilon nitrogen of the lysine was labeled with fluorescein-5-isothiocyanate (0.12 mmol) and diisopropylethylamine (0.12 mmol) in DMF. The mixture was agitated for 12 h (fluorescein-containing compounds were protected from light). The resin was then washed with DMF (3×10 mL) and twice with CH2Cl2 (10 mL) and dried under nitrogen for 1 h. The peptide was cleaved from the resin using Reagent B for 4 h and the solution collected by filtration. The volatiles were removed under reduced pressure and the residue was dried under vacuum. The peptide was precipitated with ether, collected and the precipitate was dried under a stream of nitrogen. The precipitate was added to water (1 mg/mL) and the pH of the mixture was adjusted to 8 with 10% aqueous meglumine. Cyclization of the peptide was carried out for 48 h and the solution was freeze-dried. The crude cyclic peptide was dissolved in water and purified by RP-HPLC on a C18 column with linear gradient of acetonitrile into water (both phases contained 0.1% TFA). Fractions containing the pure product were collected and freeze dried. The peptides were characterized by ES-MS and the purity was determined by RP-HPLC (linear gradient of acetonitrile into water/0.1% TFA).

Provenance & Evidence

DOI10.6084/m9.figshare.5104873.v1
Patent numberUS07910088B2
Source datasetuspto-grants-2011_03
ORD IDord-257710d7be644457999af21cb31d86b1
Source noteuspto-grants-2011_03