Thymine → 1-Ethylthymine

HRID 612821Notes

Reaction equation

HRID 612821 reaction equation
[NH:1]1[CH:9]=[C:7]([CH3:8])[C:5](=[O:6])[NH:4][C:2]1=[O:3].[H-].[Na+].Br[CH2:13][C@H:14]1O[C@@H](P(OCC)(OCC)=O)CC1>CN(C=O)C>[CH2:13]([N:1]1[CH:9]=[C:7]([CH3:8])[C:5](=[O:6])[NH:4][C:2]1=[O:3])[CH3:14]

Participants

5

Procedure

To a stirring suspension of thymine (551 mg, 3.32 mmol) in dry DMF (3 mL) was added sodium hydride (60% oil dispersion, 133 mg, 3.32 mmol). After stirring the mixture for 30 min at room temperature, a solution of cis-5-bromomethyl-2-diethoxyphosphinoyl-tetrahydrofuran (example 66) (500 mg, 1.66 mmol) in DMF (3 mL) was added via cannula. The mixture was then stirred at 90° C. for 15 h after which the mixture was cooled and quenched with saturated ammonium chloride (5 mL). The volatiles were removed under vacuo and the residue was dissolved in a mixture of dichloromethane (20 mL) and water (10 mL). The mixture was filtered and the aqueous layer was collected and extracted with dichloromethane (2×20 mL). The combined extracts were then washed with brine (20 mL), dried (MgSO4) and concentrated to dryness. Purification by chromatography eluting with EtAc, 5% MeOH in EtAc then 10% MeOH in EtAc yielded first N1 -ethyl thymine (102 mg, 40%) and then the title compound as an oil (126 mg, 22%).

Workup

  1. stirringThe mixture was then stirred at 90° C. for 15 h after which the mixture
  2. temperaturewas cooled
  3. customquenched with saturated ammonium chloride (5 mL)
  4. customThe volatiles were removed under vacuo
  5. dissolutionthe residue was dissolved in a mixture of dichloromethane (20 mL) and water (10 mL)
  6. filtrationThe mixture was filtered
  7. customthe aqueous layer was collected
  8. extractionextracted with dichloromethane (2×20 mL)
  9. washThe combined extracts were then washed with brine (20 mL)
  10. dry with materialdried (MgSO4)
  11. concentrationconcentrated to dryness
  12. customPurification by chromatography
  13. washeluting with EtAc, 5% MeOH in EtAc

Sources & evidence

ORD record
ord-9bc1c1afd4cd4240a763244881fd2b5e
Source dataset
uspto-grants-1999_12
Patent number
US06005107

Reaction notes

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