1-Ethyl-3-(3'-dimethylaminopropyl)carbodiimide → (3RS,10S)-N-benzyloxy-N-formyl-5-methyl-3-(9-oxo-1,8-diaza-tricyclo[10.6.1.013,18]nonadeca-12(19),13(18),14,16-tetraen-10-ylcarbamoyl)hexylamine

HRID 849720Notes

Reaction equation

HRID 849720 reaction equation
O=C1CC[C:17]2=CN([C:11]3[CH:12]=[CH:13][CH:14]=[CH:15][C:16]=32)CCCCCCN1.C1C=C[C:24]2[N:29]([OH:30])N=NC=2C=1.O.CCN=C=NCCCN(C)C.C(OC(=O)[CH:49]([CH3:78])[C@H:50]([C:55](=[O:77])[NH:56][C@H:57]1[CH2:74][C:73]2=[CH:75][N:66]([C:67]3[CH:68]=[CH:69][CH:70]=[CH:71][C:72]=32)[CH2:65][CH2:64][CH2:63][CH2:62][CH2:61][CH2:60][NH:59][C:58]1=[O:76])[CH2:51][CH:52]([CH3:54])[CH3:53])(C)(C)C.C([O:84]C(=O)C[C@H](C(=O)N[C@H]1CC2=CN(C3C=CC=CC=32)CCCCCCNC1=O)CC(C)C)(C)(C)C>CN(C=O)C>[CH2:17]([O:30][N:29]([CH2:78][CH2:49][CH:50]([C:55](=[O:77])[NH:56][C@H:57]1[CH2:74][C:73]2=[CH:75][N:66]([C:67]3[CH:68]=[CH:69][CH:70]=[CH:71][C:72]=32)[CH2:65][CH2:64][CH2:63][CH2:62][CH2:61][CH2:60][NH:59][C:58]1=[O:76])[CH2:51][CH:52]([CH3:53])[CH3:54])[CH:24]=[O:84])[C:16]1[CH:11]=[CH:12][CH:13]=[CH:14][CH:15]=1

Participants

7

Procedure

Alternatively, to (2R)-4-methyl-2-(t-butoxy-carbonylmethyl)pentanoic acid (1g, 4.34 mmol) in dry THF (100 mL) at -78° C. under argon was added NaN(TMS)2 (1.0M in THF, 10.9 mL, 2.5 eq) dropwise and the mixture was stirred for 1 hour. Iodomethane (0.33 mL, 1.2 eq) was added and the resulting mixture was stirred overnight from -78° C. to room temperature. The next day the reaction was quenched with water (100 mL). After extracting with ether (3×100 mL), the aqueous layer was combined with ethyl acetate and with stirring was added 4N HCl to pH=2. Sodium chloride was also added to saturation and the aqueous layer was extracted with ethyl acetate (3×100 mL). The combined organic extracts were dried over Na2SO4, filtered and concentrated to give (2R)-4-methyl-2-((1-methyl-1-t-butoxy-carbonyl)methyl)pentanoic acid as a dark brown oil (1 g). To this crude reaction product (500 mg) and (10S)-10-amino-(9-oxo-1,8-diaza-tricyclo[10.6.1.013,18 ]nonadeca-12(19),13(18),14,16-tetraene (399 mg, 0.7 eq) in dry DMF at 0° C. under argon was added HOBt-H2O (1.1 eq, 234 mg), followed by EDCI (663 mg, 2.5 eq). The resulting mixture was stirred overnight from 0° C. to room temperature. Most of the DMF was removed by pump distillation at 65° C. Then, the residue was partitioned between CH2Cl2 (150 mL). After washing with 0.5N HCl (2×75 mL), saturated NaHCO3 (2×75 mL) and brine (1×75 mL), the organic layer was dried over Na2SO4, filtered and evaporated to dryness. The crude material was purified by flash column chromatography on silica eluting with 30% ethyl acetate in petroleum ether to yield a mixture of three compounds, the two individual stereoisomers of (3R,10S)-2-methyl-5-methyl-3-(9-oxo-1,8-diaza-tricyclo-[10.6.1.013,18 ]nonadeca-12(19),13(18), 14,16-tetraen-10-ylcarbamoyl)hexanoic acid t-butyl ester and (3R,10S)-5-methyl-3-(9-oxo-1,8-diaza-tricyclo-[10.6.1.013,18 ]nonadeca-12(19), 13(18), 14,16-tetraen-10-ylcarbamoyl)hexanoic acid t-butyl ester. Further purification provided separation of the three compounds; (3R,10S)-5-methyl-3-(9-oxo-1,8-diazatricyclo-[10.6.1.013,18 ]nonadeca-12(19),13(18),14,16-tetraen-10-ylcarbamoyl)hexanoic acid t-butyl ester (13 mg) as a white solid; 1:1 mixture of the stereoisomers (5 mg) as a white solid; and the less polar stereoisomer of (3R,10S)-2-methyl-5-methyl-3-(9-oxo-1,8-diaza-tricyclo-[10.6.1.013,18 ]nonadeca-12(19),13(18),14,16-tetraen-10-ylcarbamoyl) hexanoic acid t-butyl ester (15 mg); 300 MHz 1H NMR in CDCL3 (less polar diastereomer): δ (-0.2)-(-0.05) (m, 1H); 0.5-0.7 (m, 1H); 0.9 (dd, J=4 Hz, J=6.7 Hz, 6H); 1.15 (d, J=8.4 Hz, 3H); 1.18-1.4 (m, 3H); 1.41 (s, 9H); 1.45-1.73 (m, 4H); 1.75-1.8 (m, 2H); 2.5-2.7 (m, 3H); 2.89 (dd, J=10.9 Hz J=15 Hz, 1H); 3.34-3.5 (m, 2H); 3.95-4.1 (m, 1H); 4.25-4.4 (m, 1H); 4.72-4.82 (m, 1H); 5.22-5.3 (m, 1H); 6.52 (d, J=7.5 Hz, 1H); 6.91 (s, 1H); 7.13 (dd, J=6.7 Hz, J=8.4 Hz, 1H); 7.22 (dd, J=5 Hz, J=7.1 Hz, 1H); 7.34 (d, J=8.4 Hz, 1H); 7.84 (d, J=8.4 Hz, 1H).

Workup

  1. customMost of the DMF was removed by pump distillation at 65° C
  2. customThen, the residue was partitioned between CH2Cl2 (150 mL)
  3. washAfter washing with 0.5N HCl (2×75 mL), saturated NaHCO3 (2×75 mL) and brine (1×75 mL)
  4. dry with materialthe organic layer was dried over Na2SO4
  5. filtrationfiltered
  6. customevaporated to dryness
  7. customThe crude material was purified by flash column chromatography on silica eluting with 30% ethyl acetate in petroleum ether
  8. customto yield
  9. additiona mixture of three compounds
  10. customFurther purification
  11. customprovided
  12. customseparation of the three compounds
  13. addition1:1 mixture of the stereoisomers (5 mg) as a white solid

Sources & evidence

ORD record
ord-443c68ee4d3149b8b2181d97ccb7bc4b
Source dataset
uspto-grants-2000_01
Patent number
US06013792

Reaction notes

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