Udp-Galactose → N-Acetyl-D-Glucosamine

HRID 429740

Reaktionsgleichung

Reaktionsgleichung von HRID 429740
[CH3:1][C:2]([NH:4][C@H:5]1[CH:10]([OH:11])[O:9][C@H:8]([CH2:12][OH:13])[C@@H:7]([O:14][C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@@H:6]1[OH:26])=[O:3].C1C(=O)NC(=O)N([C@@H]2O[C@H](COP(OP(O[C@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3O)(O)=O)(O)=O)[C@@H](O)[C@H]2O)C=1>[As](C)(C)(=O)[O-]>[OH:11][CH:10]1[O:9][C@H:8]([CH2:12][OH:13])[C@@H:7]([OH:14])[C@H:6]([OH:26])[C@H:5]1[NH:4][C:2]([CH3:1])=[O:3]

Komponenten

4

Edukt 2

HCID 18068Udp-Galactose2×HCID 9800166beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine

Produkt 1

HCID 439174N-Acetyl-D-Glucosamine

Reagenzien, Katalysatoren, Lösungsmittel 1

HCID 167250CacodylateLösungsmittel

Versuchsvorschrift

Initial velocities of the enzyme reaction were determined by measuring the rate of LacNAc formation with a slight modification of the assay by Pierce et al. [Pierce et al., Anal. Biochem., 102:441 (1980)]. All the reactions were carried out in 100 mM cacodylate buffer (pH 7.5) with fixed concentrations of Mn2+ (9.3 mM) and UDP-Gal (0.1 mM; 58.5 cpm/pmol of UDP-14C-Gal) in 100 mL of solution. The reaction was initiated by the addition of GalT (0.05 U, 120 mg protein; from Sigma) and permitted to stand at 20° C. for 30 minutes. Nonspecific hydrolysis of UDP-Gal was measured by the control reaction in the absence of GalT. The reaction was stopped by passing through a column of QAE-Sephadex (700 mL), and eluted by gentle air pressure to remove the unreacted UDP-Gal. The reaction vial was rinsed twice with 400 mL of water each and passed through the resin column. The filtrates were collected and directly transferred into a scintillation vial. The scintillation fluid was added to the vial, and then radioactivity was counted by a liquid scintillation counter. The data were analyzed by a double reciprocal plot to obtain Km (1.5 mM for GlcNAc) [a value of 1.3±1 mM was reported in Palcic et al., Carbohydr. Res., 159:315 (1987)] and Ki (0.46±0.06 mM) for UDP. Similarly, IC50 value of UDP for GalT was determined using different concentration of UDP.

Aufarbeitung

  1. customInitial velocities of the enzyme reaction
  2. additionThe reaction was initiated by the addition of GalT (0.05 U, 120 mg protein; from Sigma)
  3. customwas measured by the control reaction in the absence of GalT
  4. washeluted by gentle air pressure
  5. customto remove the unreacted UDP-Gal
  6. customThe reaction
  7. washvial was rinsed twice with 400 mL of water each and
  8. customThe filtrates were collected
  9. additionThe scintillation fluid was added to the vial, and then radioactivity

Quellen und Nachweise

ORD-Eintrag
ord-05aae5b58f2242e8b57f42f1e8ec4a6d
Quelldatensatz
uspto-grants-2001_11
Patentnummer
US06319695B1

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