Basic information
- Standard SMILES
Cc1cn([C@H]2C[C@H](O)[C@@H](COP(=O)(O)OP(=O)(O)OC3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)O2)c(=O)[nH]c1=O- InChIKey
YSYKRGRSMLTJNL-KFQCIAAJSA-N- Molecular formula
- C16H26N2O16P2
- Average molar mass
- 564.3 g/mol
- Monoisotopic mass
- 564.07575674
Names & identifiers
- Preferred name
- dTDP-D-glucose
- IUPAC
- [hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] [(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] hydrogen phosphate
Names & synonyms
dTDP-D-glucoseCHEBI:35248thymidine 5'-[3-(D-glucopyranosyl) dihydrogen diphosphate]{[hydroxy({[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphoryl]oxy}({[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)oxolan-2-yl]methoxy})phosphinic acidthymidine 5'-(3-(D-glucopyranosyl) dihydrogen diphosphate)((hydroxy((((3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl)oxy))phosphoryl)oxy)((((2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)oxolan-2-yl)methoxy))phosphinic acidRefChem:135914SCHEMBL29424336YSYKRGRSMLTJNL-KFQCIAAJSA-N[hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] [(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] hydrogen phosphateThymidine-5-diphosphate-D-glucose disodium saltQ27116445
Database identifiers
- PubChem CID
- 439324
- ChEBI
CHEBI:35248- Nikkaji
- J2.032.930K
Properties
Computed structural properties
- XLogP
- -5.5
- Topological polar surface area
- 271 Ų
- Hydrogen bond donors
- 8
- Hydrogen bond acceptors
- 16
- Rotatable bonds
- 9
- Heavy atoms
- 36
- Formal charge
- 0
- Complexity
- 978
Experimental & physicochemical properties
Collision Cross Section
209.5 Ų [M-H]- [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]；209.9 Ų [M+Na]+ [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]；218.2 Ų [M+Na-2H]- [CCS Type: DT; Method: single field calibrated with ESI Low Concentration Tuning Mix (Agilent)]
Related reactions
1 records
Compound notes
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