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YOYO-1

HCID 6438136
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Basic information

CAS
143413-85-8
Standard SMILES
CN1/C(=C/c2cc[n+](CCC[N+](C)(C)CCC[N+](C)(C)CCC[n+]3ccc(/C=C4/Oc5ccccc5N4C)c4ccccc43)c3ccccc23)Oc2ccccc21.[I-].[I-].[I-].[I-]
InChIKey
GRRMZXFOOGQMFA-UHFFFAOYSA-J
Molecular formula
C49H58I4N6O2
Average molar mass
1,270.659 g/mol
Monoisotopic mass
1,270.0800171

Names & identifiers

Preferred name
YOYO-1
English name
2-([1-(3-[[3-(Dimethyl(3-[4-[(E)-(3-methyl-1,3-benzoxazol-3-ium-2-yl)methylidene]-1(4H)-quinolinyl]propyl)ammonio)propyl](dimethyl)ammonio]propyl)-4(1H)-quinolinylidene]methyl)-3-methyl-1,3-benzoxazol-3-ium tetraiodide
Molecular formula
C49H58IN6O2+3
Molecular weight
889.95

Names & synonyms

YOYO 1YODi-1DiYO?-1Chebi:51224Yoyo 1 IodideYOYO?*-1 equivalentYOYO-1(1mM in DMSO)YOYO 1 Green Fluorescent DyeThiazole orange dimer YOYO 1o(benzo-1,3-oxazole)-2-methylidene)quinolinium

Database identifiers

CAS
143413-85-8
PubChem CID
6438136
DTXSID
DTXSID801030161
UNII
1B34829IG0

Properties

Physicochemical properties

Melting point
250 ℃ · >250 ℃
solubility
Soluble in dimethyl sulfoxide, water
form
powder
color
Orange-red
Appearance
orange solution
ex/em
491 · 491/509 nm
ε(extinction coefficient)
98900 cm−1M−1 · 98900 cm−1M−1
Φ(quantum yield)
0.52 · 0.52
λmax
491 nm · 491 nm
Biological Applications
Nucleic acid hybridization; nucleic acid sequencing; detecting nucleic acids,cells,human papilloma virus (HPV),pathogens,spores,cancer cells,stress biomarkers,viruses
FDA UNII
1 B34829IG0 · 1B34829IG0

Chemistry & industry

Applications · 2 items

DescriptionYODi-1 (Oxazole Yellow Homodimer, also known as YOYO®-1) is a green fluorescent carbocyanine dimeric dye. YODi-1 is a cell-impermeant nucleic acid stain that is nonfluorescent in the absence of nucleic acids but exhibits over a thousand-fold fluorescence enhancement upon binding to dsDNA.The bright fluorescence signal and low background make YODi-1 ideal for staining nucleic acids on microarrays, as well as for nuclear and chromosome counterstaining in multicolor fluorescence labeling experiments. YODi-1 can also be used for the analysis of single molecules of DNA.

UsesThiazole orange dimer YOYO 1 is a green fluorescent dye used for DNA staining. It belongs to the monomethine cyanine dye family and is a tetracationic homodimer of oxazole yellow (abbreviated as YO, hence the name YOYO), usually provided as a tetraiodide salt. In aqueous buffer, the free YOYO-1 dye (λmax 458 nm; λmax 564 nm) has a very low fluorescence quantum yield, but after binding to double-stranded DNA through diintercalation, the fluorescence intensity is increased by 3200 times (λmax 489 nm; λmax 509 nm).

Suppliers14 total

上海阿拉丁生化科技股份有限公司400-6206333 13167063860 · [email protected]
江苏艾康生物医药研发有限公司025-025-66113011 15955137747 · [email protected]
梯希爱(上海)化工贸易有限公司021-61109150 · [email protected]
北京博奥森生物技术有限公司400-901-9800 18611424007 · [email protected]
TargetMol 中国(陶术生物)400-821-0310 15002144251 · [email protected]
天津普西唐生物医药科技有限公司010-60605840 · [email protected]
西安强化生物科技有限公司15339237155 15339237155 · [email protected]

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Compound notes

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On this pageBasic informationNames & identifiersPropertiesChemistry & industryRelated reactionsCompound notes
上海源叶生物科技有限公司18916372613 · [email protected]
深圳市绿珀生物有限公司14714316277 · [email protected]
ATK CHEMICAL COMPANY LIMITED+undefined-21-51877795 · [email protected]
Aladdin Scientific[email protected]
BOC Sciences+1-631-485-4226 · [email protected]
北京欧凯纳斯生化科技有限公司01062651721 18610486005 · [email protected]
上海梅凯科技有限公司15300790979 18964014359 · [email protected]