Lithium Hexamethyldisilazide → 5-(3-(2-(Methylthio)pyrimidin-4-yl)pyridin-2-yloxy)pyridin-2-amine

HRID 252654Notes

Reaction equation

HRID 252654 reaction equation
C1(P(C2CCCCC2)C2C=CC=CC=2C2C=CC=CC=2)CCCCC1.Cl[C:27]1[N:32]=[CH:31][C:30]([O:33][C:34]2[C:39]([C:40]3[CH:45]=[CH:44][N:43]=[C:42]([S:46][CH3:47])[N:41]=3)=[CH:38][CH:37]=[CH:36][N:35]=2)=[CH:29][CH:28]=1.C[Si]([N-:52][Si](C)(C)C)(C)C.[Li+]>O1CCOCC1.C1C=CC(/C=C/C(/C=C/C2C=CC=CC=2)=O)=CC=1.C1C=CC(/C=C/C(/C=C/C2C=CC=CC=2)=O)=CC=1.C1C=CC(/C=C/C(/C=C/C2C=CC=CC=2)=O)=CC=1.[Pd].[Pd]>[CH3:47][S:46][C:42]1[N:41]=[C:40]([C:39]2[C:34]([O:33][C:30]3[CH:29]=[CH:28][C:27]([NH2:52])=[N:32][CH:31]=3)=[N:35][CH:36]=[CH:37][CH:38]=2)[CH:45]=[CH:44][N:43]=1

Participants

6

Conditions

Temperature
65 °C

Procedure

To a brown solution of tris(dibenzylideneacetone)dipalladium (o) (0.68 g, 0.75 mmol), 2-(dicyclohexylphosphino)biphenyl (0.50 g, 1.4 mmol), and 4-(2-(6-chloropyridin-3-yloxy) pyridin-3-yl)-2-(methylthio)pyrimidine (1.9 g, 5.7 mmol) in 15 mL dioxane was added solid lithium bis(trimethylsilyl) amide (2.9 g, 17 mmol). Argon was bubbled through the reaction for 1 min, and then it was sealed and heated to 65° C. for 3.5 days. The reaction was cooled to ambient temperature, diluted with water, and acidified to a pH of about 1 with stirring, then brought to pH of about 5 with 6N NaOH. Dichloromethane was added and reaction was filtered through 2 cm Celite® in a frit, rinsing with MC and water. The layers were separated, and the organic layer was dried over anhyd. Na2SO4, filtered, and concentrated in vacuo. The material was diluted in 100 mL MC, and extracted 3×100 mL 1 N HCl. The aqueous layers were cooled to 0° C. and basified with 6 N NaOH to about pH of 10. The aqueous layer was extracted 3×100 mL with MC. The organic layers were combined, dried over anhdrous sodium sulfate, filtered, and concentrated in vacuo to a brown oil. The oil residue was purified by silica gel chromatography, 120 g, 0-50% MC-90/10 MC/MeOH, to afford 5-(3-(2-(methylthio)pyrimidin-4-yl)pyridin-2-yloxy)pyridin-2-amine as a yellow solid. MS m/z=312 [M+H]+. Calc'd for C15H13N5OS: 311.4.

Workup

  1. customArgon was bubbled through the reaction for 1 min
  2. customit was sealed
  3. temperatureThe reaction was cooled to ambient temperature
  4. additiondiluted with water
  5. additionDichloromethane was added
  6. customreaction
  7. filtrationwas filtered through 2 cm Celite® in a frit
  8. washrinsing with MC and water
  9. customThe layers were separated
  10. customthe organic layer was dried over anhyd
  11. filtrationNa2SO4, filtered
  12. concentrationconcentrated in vacuo
  13. additionThe material was diluted in 100 mL MC
  14. extractionextracted 3×100 mL 1 N HCl
  15. temperatureThe aqueous layers were cooled to 0° C. and basified with 6 N NaOH to about pH of 10
  16. extractionThe aqueous layer was extracted 3×100 mL with MC
  17. dry with materialdried over anhdrous sodium sulfate
  18. filtrationfiltered
  19. concentrationconcentrated in vacuo to a brown oil
  20. customThe oil residue was purified by silica gel chromatography, 120 g, 0-50% MC-90/10 MC/MeOH

Sources & evidence

ORD record
ord-c8e5ecc692f649779c1dc3df47d7d4db
Source dataset
uspto-grants-2011_01
Patent number
US07868177B2

Reaction notes

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