HCID 86667430, compound → (1R,3S)-3-(2-chloro-5-fluoropyrimidin-4-ylamino)-1-(methylthiomethyl)cyclohexanol

HRID 527004Notes

Reaction equation

HRID 527004 reaction equation
[Cl:1][C:2]1[N:7]=[C:6]([NH:8][C@H:9]2[CH2:16][CH2:15][CH2:14][C@@:11]3([O:13][CH2:12]3)[CH2:10]2)[C:5]([F:17])=[CH:4][N:3]=1.[CH3:18][S:19][Na]>C1COCC1>[Cl:1][C:2]1[N:7]=[C:6]([NH:8][C@H:9]2[CH2:16][CH2:15][CH2:14][C@@:11]([CH2:12][S:19][CH3:18])([OH:13])[CH2:10]2)[C:5]([F:17])=[CH:4][N:3]=1

Participants

4

Procedure

2-chloro-5-fluoro-N-((3R,5S)-1-oxaspiro[2.5]octan-5-yl)pyrimidin-4-amine, 49b, (0.10 g, 0.38 mmol) was dissolved in THF (2 mL). Methylsulfanylsodium (0.08 g, 1.15 mmol) was added to the reaction and the mixture was allowed to stir at room temperature for 3 hrs. An additional 36 mg portion of methylsulfanylsodium in THF (2 mL) was added and the reaction mixture was stirred overnight at room temperature. After LCMS showed starting material was still present, the reaction was warmed to 50° C. and stirred for 1 hr. The reaction was quenched with water and diluted with EtOAc. The layers were separated and the organic phase was washed with brine, dried (MgSO4), filtered and evaporated to dryness. The crude residue was purified via silica gel chromatography (0-100% Etoac/hexanes gradient). The product (contaminated with small amount of staring material) was carried on to the next step without further purification. LCMS RT=3.56 (M+1) 306.2.

Workup

  1. stirringthe reaction mixture was stirred overnight at room temperature
  2. temperaturethe reaction was warmed to 50° C.
  3. stirringstirred for 1 hr
  4. customThe reaction was quenched with water
  5. additiondiluted with EtOAc
  6. customThe layers were separated
  7. washthe organic phase was washed with brine
  8. dry with materialdried (MgSO4)
  9. filtrationfiltered
  10. customevaporated to dryness
  11. customThe crude residue was purified via silica gel chromatography (0-100% Etoac/hexanes gradient)
  12. customThe product (contaminated with small amount of staring material) was carried on to the next step without further purification
  13. customLCMS RT=3.56 (M+1) 306.2

Sources & evidence

ORD record
ord-b0e6d08b02d049c4bb51c9213c26bd8b
Source dataset
uspto-grants-2016_05
Patent number
US09345708B2

Reaction notes

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