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Formate → beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine

HRID 234735
Notizen
Druckvorschau

Reaktionsgleichung

Reaktionsgleichung von HRID 234735
CCC([CH2:6][O:7]C(C(N(CC[NH+](C)C)C)=O)(C1C=CC=CC=1)C1C=CC=CC=1)CC.[Cl-].[As](C)(C)(=O)[O-].[Na+].P([O:49][CH2:50][C@H:51]1[O:55][C@@H:54]([N:56]2[C:65]3N=CN=C(N)[C:59]=3N=C2)[C@H:53]([OH:66])[C@@H:52]1[OH:67])(OP(OP(O)(O)=O)(O)=O)(=O)O.[O:68]=[CH:69][C@H:70]([C@@H:72]([C@@H:74]([C@H:76]([CH3:78])[OH:77])[OH:75])[OH:73])[OH:71].C([O-])=[O:80]>>[C:65]([NH:56][C@@H:54]1[C@@H:53]([OH:66])[C@H:52]([O:67][C@@H:78]2[O:71][C@H:70]([CH2:69][OH:68])[C@H:72]([OH:73])[C@H:74]([OH:75])[C@H:76]2[OH:77])[C@@H:51]([CH2:50][OH:49])[O:55][CH:6]1[OH:7])(=[O:80])[CH3:59]
KomponentenVersuchsvorschriftAufarbeitungQuellen und NachweiseNotizen zur Reaktion

Komponenten

6

Edukt 5

HCID 283FormateHCID 59575'-AtpHCID 19153X 100HCID 2724247Sodium CacodylateHCID 3034656L-(-)-Fucose

Produkt 1

HCID 9800166beta-D-galactosyl-(1->4)-N-acetyl-D-glucosamine

Versuchsvorschrift

Fucosyltransferase assays. Cell extracts containing 1% Triton X-100 were prepared from transfected COS-1 cells. Fucosyltransferase assays were performed in a total volume of 20 μl , and contained 50 mM sodium cacodylate, pH 6.2, 5 mM ATP, 10 mM fucose, 20 mM MnCl2, 3 μM GDP-14C-fucose, and 5 μl (30 μg protein) of cell extract. Acceptor substrates were added to a final concentration of 20 mM. Reactions were incubated at 37° C. for 1 hour and terminated by addition of 20 μl ethanol, followed by addition of 600 μl of distilled water. An aliquot of each reaction (50 μl) was subjected to scintillation counting to determine total radioactivity in the reaction. Another aliquot (200 μl) was applied to a column containing 400 μl of Dowex IX2-400, formate form. The flow through fraction, and 2 μl of a subsequent water elution, were collected and pooled, and an aliquot was subjected to scintillation counting to quantitate incorporation of radioactive fucose into neutral product. Descending paper chromatography was used to confirm the structure of the product formed with the acceptor N-acetyllactosamine. The neutral product in the Dowex column eluate was concentrated by lyophilization, resuspended in a small volume of water, and fractionated through Whatman No. 40 in phenol/isopropanol/formic acid/water (85:5:10:100, lower layer). After chromatography (40 hours), the air-dried chromatogram was cut into 1 cm strips and the strips eluted into 2 ml of water. Radioactivity in each eluate was determined by scintillation counting after mixing with 10 ml of scintillation cocktail.

Aufarbeitung

  1. customwere prepared
  2. extractionextract
  3. additionAcceptor substrates were added to a final concentration of 20 mM
  4. customterminated by addition of 20 μl ethanol
  5. additionfollowed by addition of 600 μl of distilled water
  6. customAn aliquot of each reaction (50 μl)
  7. customin the reaction
  8. washThe flow through fraction, and 2 μl of a subsequent water elution
  9. customwere collected

Quellen und Nachweise

ORD-Eintrag
ord-7ffc44a228d44756b6f15ff6f40d2408
Quelldatensatz
uspto-grants-1997_01
DOI
10.6084/m9.figshare.5104873.v1
Patentnummer
US05595900

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