Phenol → 5'-Thymidylic acid
Reaction equation
C(O)C(N)(CO)CO.Cl.[Mg+2].[Cl-].[Cl-].[Na+].[Cl-].SCCO.NCC([O-])=O.[Na+].C1(O)C=CC=CC=1.[As](C)(C)(=O)[O-].[Na+].[OH:38][P:39](=[O:66])([O:49][CH2:50][C@H:51]1[O:65][C@@H:55]([N:56]2[CH:62]=[C:60]([CH3:61])[C:59](=[O:63])[NH:58][C:57]2=[O:64])[CH2:54][C@@H:52]1[OH:53])[O:40]P(=O)(OP(=O)(O)O)O>C(O)C>[CH3:61][C:60]1[C:59](=[O:63])[NH:58][C:57](=[O:64])[N:56]([C@@H:55]2[O:65][C@H:51]([CH2:50][O:49][P:39]([OH:40])([OH:66])=[O:38])[C@@H:52]([OH:53])[CH2:54]2)[CH:62]=1Participants
Reactant 8
Product 1
Reagents, catalysts & solvents 1
Procedure
20 μg of plasmid pBR322 and 10 units of EcoRI (manufactured and sold by Bethesda Research Laboratories, Inc., U.S.A.) are incubated at 37° C. for 2 hours in a 150 μl mixture containing 10 mM Tris-HCl (pH 7.5), 6 mM MgCl2, 50 mM NaCl, 6 mM 2-mercaptoethanol and 200 μg/μl BSA. The mixture is extracted with equal volume of diethyl ether, followed by the addition of ethanol to form a precipitate. Then, the precipitate is dissolved in a 100 μl mixture containing 0.1 mM sodium glycinate (pH 9.5), 5 mM MgCl2 and 50 μg/μl BSA. Into the mixture is added 17 units of λ-exonuclease, followed by incubation at 37° C. for one hour. Then, the mixture is subjected to phenol treatment, followed by the addition of ethanol to form a precipitate. The precipitate (cleaved pBR322) is added to a 300 μl reaction mixture containing 100 mM sodium cacodylate (pH 7.2), 10 mM Na2HPO4, 5 mM MgCl2, 1 mM dTTP, 50 μg/μl BSA and 3-6 units/μg (DNA) TdT, followed by incubation at 37° C. for 20 minutes. Then the mixture is extracted with phenolchloform, followed by the addition of ethanol to recover plasmid.
Workup
- extractionThe mixture is extracted with equal volume of diethyl ether
- additionfollowed by the addition of ethanol
- customto form a precipitate
- additionInto the mixture is added 17 units of λ-exonuclease
- customto form a precipitate
- additionThe precipitate (cleaved pBR322) is added to a 300 μl reaction mixture
- waitfollowed by incubation at 37° C. for 20 minutes
- extractionThen the mixture is extracted with phenolchloform
- additionfollowed by the addition of ethanol
- customto recover plasmid
Sources & evidence
- ORD record
- ord-77424235a43e43d2a387cced32b2bfe7
- Source dataset
- uspto-grants-1984_07
- Patent number
- US04457867
Reaction notes
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