Sodium hydride → HCID 16110080, compound

HRID 1692192Notes

Reaction equation

HRID 1692192 reaction equation
[OH:1][C@H:2]([CH2:12][O:13]C(C1C=CC=CC=1)(C1C=CC=CC=1)C1C=CC=CC=1)[CH2:3][N:4]1[CH:11]=[N:10][C:8]([NH2:9])=[N:7][C:5]1=[O:6].S(O[CH2:44][P:45](=[O:54])([O:50]C(C)C)[O:46]C(C)C)(C1C=CC(C)=CC=1)(=O)=O.[H-].[Na+].Br[Si](C)(C)C>CN(C=O)C.C(O)(=O)C>[OH:13][CH2:12][C@@H:2]([O:1][CH2:44][P:45]([OH:54])([OH:50])=[O:46])[CH2:3][N:4]1[CH:11]=[N:10][C:8]([NH2:9])=[N:7][C:5]1=[O:6]

Participants

7

Conditions

Temperature
-20 °C

Procedure

A solution of 1-[(2S)-2-hydroxy-3-(triphenylmethoxy)propyl]-5-azacytosine (934 mg, 2.18 mmol) and diisopropyl tosyloxymethylphosphonate (1.05 g, 3 mmol) in DMF (30 ml) was cooled to −20° C. and 60% oil dispersion of NaH (240 mg, 6 mmol) was added. The mixture was stirred at −20° C. for 15 min, then the temperature was let to rise to approx. 25° C. (room temperature) and the stirring continued for additional 15 h. Acetic acid was added drop wise to pH 7, the mixture evaporated and the residue coevaporated with toluene (2×50 ml). Acetonitrile (30 ml) was added, followed by bromotrimethylsilane (2.7 ml, 20 mmol), the resulting suspension stirred in dark at room temperature for 48 h and evaporated. The residue was coevaporated with acetonitrile (3×50 ml). 90% Aqueous solution of methanol (50 ml) was added and the solution neutralized to pH 7.0 with 0.2 M triethylammonium hydrogencarbonate. The solution was concentrated to minimal volume (approx. 5 ml) and partitioned between water (100 ml) and ether (100 ml). An aqueous layer was concentrated to a volume 5 ml and applied onto a column of Dowex 1 (AcO− form, 60 ml). Elution was performed with water (300 ml), then with a linear gradient of acetic acid (0.5-1 M, 1 l) and lastly, the pure product was eluted with 1 M formic acid. UV absorbing fractions were taken down in vacuo and the residue coevaporated several times with water till a complete removal of acid. The residue was crystallized from aqueous ethanol, crystals collected by suction, washed with ethanol and ether and dried in vacuo. Yield: 200 mg (33%) of pure HPMP-5-azaC.

Workup

  1. customto rise to approx. 25° C.
  2. custom(room temperature)
  3. waitthe stirring continued for additional 15 h
  4. customthe mixture evaporated
  5. additionAcetonitrile (30 ml) was added
  6. stirringthe resulting suspension stirred in dark at room temperature for 48 h
  7. customevaporated
  8. addition90% Aqueous solution of methanol (50 ml) was added
  9. concentrationThe solution was concentrated to minimal volume (approx. 5 ml)
  10. custompartitioned between water (100 ml) and ether (100 ml)
  11. concentrationAn aqueous layer was concentrated to a volume 5 ml
  12. washElution
  13. washwith a linear gradient of acetic acid (0.5-1 M, 1 l) and lastly, the pure product was eluted with 1 M formic acid
  14. customUV absorbing fractions
  15. customtill a complete removal of acid
  16. customThe residue was crystallized from aqueous ethanol, crystals
  17. customcollected by suction
  18. washwashed with ethanol and ether
  19. customdried in vacuo

Sources & evidence

ORD record
ord-10c4fd24000d41638455a2bf6db34f20
Source dataset
uspto-grants-2012_04
Patent number
US08153787B2

Reaction notes

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