Trifluoroacetic acid → HCID 58557354, compound

HRID 1969750Notes

Reaction equation

HRID 1969750 reaction equation
[CH2:1]([N:8]([CH2:38][C:39]1[CH:44]=[CH:43][CH:42]=[CH:41][CH:40]=1)[C@@H:9]1[CH2:13][C@H:12]([C:14](=O)[CH2:15][NH:16][C:17]2[N:18]=[C:19]3[CH:25]=[CH:24][N:23](S(C4C=CC(C)=CC=4)(=O)=O)[C:20]3=[N:21][CH:22]=2)[C@H:11]([CH3:37])[CH2:10]1)[C:2]1[CH:7]=[CH:6][CH:5]=[CH:4][CH:3]=1.C(O)(C(F)(F)F)=O.C(OC(C(F)(F)F)=O)(C(F)(F)F)=O.[OH-].[Na+].CC1CCCO1>C(#N)C.[Cl-].[Na+].O>[CH2:1]([N:8]([CH2:38][C:39]1[CH:40]=[CH:41][CH:42]=[CH:43][CH:44]=1)[C@H:9]1[CH2:10][C@@H:11]([CH3:37])[C@@H:12]([C:14]2[N:18]3[C:19]4[CH:25]=[CH:24][NH:23][C:20]=4[N:21]=[CH:22][C:17]3=[N:16][CH:15]=2)[CH2:13]1)[C:2]1[CH:3]=[CH:4][CH:5]=[CH:6][CH:7]=1

Participants

8

Conditions

Temperature
40 °C

Procedure

To a 250 mL round-bottomed flask 1-((1S,2R,4S)-4-(dibenzylamino)-2-methylcyclopentyl)-2-(5-tosyl-5H-pyrrolo[2,3-b]pyrazin-2-ylamino)ethanone (11.2 g, 17.51 mmol) in acetonitrile (60 ml) was added. The mixture was cooled with an ice bath and TFA (2.70 ml, 35.0 mmol) and TFAA (24.46 ml, 175 mmol) was added. The resulting mixture was warmed and stirred at about 40° C. for about 42 h. The reaction was then cooled in an ice bath and quenched with methanol (7 mL). After warming to ambient temperature and stirring for about 1 h, it was poured into ethyl acetate (100 mL) and aqueous sodium carbonate (10% w/v, 200 mL). The layers were separated and the organic layer concentrated. The residue was dissolved in THF (120 ml) and 2N sodium hydroxide (35.0 ml, 70.0 mmol) was added. The reaction mixture was warmed to about 60° C. and stirred for about 16 h. After cooling to ambient temperature, 2-methyl-tetrahydrofuran (100 mL) and brine (100 mL) were added and the layers separated. The aqueous layer was extracted with 2-methyl-tetrahydrofuran (50 mL) and the combined organic layers washed with brine (50 mL). The organic layer was concentrated, dissolved in EtOH (100 mL) and treated with charcoal (500 mg) for about 1 h. The charcoal was filtered off and the ethanol removed under reduced pressure. The residue was taken up in CHCl3 (50 mL) warmed to about 50° C. and heptane (50 mL) was added. After cooling to ambient temperature, the product was collected, washed with 1:2 CHCl3:heptane (30 mL) and dried in a vacuum oven to afford (1S,3S,4R)-N,N-dibenzyl-3-(3H-imidazo[1,2-a]pyrrolo[2,3-e]pyrazin-8-yl)-4-methylcyclopentanamine as a tan solid (5.1 g, 67%) 1H NMR (400 MHz, DMSO) δ 12.18 (s, 1H), 8.52 (s, 1H), 7.60 (s, 1H), 7.44-7.29 (m, 8H), 7.22 (t, J=7.2 Hz, 2H), 6.84 (d, J=3.4 Hz, 1H), 3.86 (dd, J=17.6, 8.8 Hz, 1H), 3.77-3.59 (m, 4H), 3.41-3.17 (m, 2H), 2.64-2.53 (m, 1H), 2.32-2.06 (m, 3H), 1.49-1.30 (m, 1H), 0.40 (d, J=7.0 Hz, 3H).

Workup

  1. temperatureThe mixture was cooled with an ice bath
  2. temperatureThe resulting mixture was warmed
  3. temperatureThe reaction was then cooled in an ice bath
  4. customquenched with methanol (7 mL)
  5. temperatureAfter warming to ambient temperature
  6. stirringstirring for about 1 h
  7. additionit was poured into ethyl acetate (100 mL) and aqueous sodium carbonate (10% w/v, 200 mL)
  8. customThe layers were separated
  9. concentrationthe organic layer concentrated
  10. dissolutionThe residue was dissolved in THF (120 ml)
  11. temperatureThe reaction mixture was warmed to about 60° C.
  12. stirringstirred for about 16 h
  13. temperatureAfter cooling to ambient temperature
  14. customthe layers separated
  15. extractionThe aqueous layer was extracted with 2-methyl-tetrahydrofuran (50 mL)
  16. washthe combined organic layers washed with brine (50 mL)
  17. concentrationThe organic layer was concentrated
  18. dissolutiondissolved in EtOH (100 mL)
  19. additiontreated with charcoal (500 mg) for about 1 h
  20. filtrationThe charcoal was filtered off
  21. customthe ethanol removed under reduced pressure
  22. temperaturewarmed to about 50° C.
  23. additionheptane (50 mL) was added
  24. temperatureAfter cooling to ambient temperature
  25. customthe product was collected
  26. washwashed with 1:2 CHCl3
  27. dry with materialheptane (30 mL) and dried in a vacuum oven

Sources & evidence

ORD record
ord-526d44add61e4757a41257cc5e0b11eb
Source dataset
uspto-grants-2013_04
Patent number
US08426411B2

Reaction notes

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