Triisopropyl borate → (2-Aminopyrimidin-5-yl)boronic acid

HRID 341324Notes

Reaction equation

HRID 341324 reaction equation
Br[C:2]1[CH:3]=[N:4][C:5]([NH2:8])=[N:6][CH:7]=1.C[Si]([N-][Si](C)(C)C)(C)C.[Li+].C([Li])CCC.[B:24](OC(C)C)([O:29]C(C)C)[O:25]C(C)C>O.CO.O1CCCC1>[NH2:8][C:5]1[N:4]=[CH:3][C:2]([B:24]([OH:29])[OH:25])=[CH:7][N:6]=1

Participants

8

Conditions

Temperature
2.5 °C

Procedure

By the alternative synthetic route in Scheme 8, to a 3-L flask under nitrogen was charged tetrahydrofuran (1055 mL), followed by 5-bromopyrimidine-2-amine 9 (70.0 g, 0.40 mol). The mixture was cooled to a temperature between −60° C. and −70° C. and lithium bis(trimethylsilyl)amide (LiHMDS) (1M in tetrahydrofuran, 483 mL, 0.483 mol) was charged over 30 min while maintaining the temperature between −60° C. and −70° C. The mixture was stirred at −60° C. to −70° C. for 1 h. n-Butyllithium (2.5 M in hexanes, 515 mL, 1.29 mol) was charged over 1 h while maintaining the temperature between −60° C. and −70° C., and the reaction mixture was then aged for 2 h. Additional n-butyllithium (2.5 M in hexanes, 48 mL, 0.12 mol) was charged over 15 min while maintaining the temperature between −60° C. and −70° C., and the reaction mixture was stirred for 1 h. To the mixture was added triisopropyl borate (91.0 g, 0.48 mol) over 1 h while maintaining the temperature between −60° C. and −70° C., and the reaction mixture was stirred for 1 h. The mixture was then allowed to warm to 0-5° C. and water (700 mL) was added over 1 h. After being aged at 0-5° C. for 30 min, the resulting layers were separated. To the aqueous layer was added water (420 mL) over 30 min, followed by addition of tert-butyl methyl ether (822 mL). The mixture was allowed to warm to 20-25° C. and was stirred for 30 min. The layers were separated and the aqueous layer was washed with tert-butyl methyl ether (5×700 mL). The aqueous layer was cooled to 0-5° C., and 35% aqueous hydrochloric acid solution (137 mL) was added over 1 h while maintaining the temperature between 0-5° C. The mixture was stirred at 0-5° C. for 1.5 h, filtered, washed with water (14 mL) and the cake was dried under vacuum at 45-50° C. to afford the crude product (26.7 g). The crude product was charged to a 5-L flask, followed by addition of methanol (908 mL), and the mixture was stirred at room temperature (rt) for 20 min. The mixture was warmed to 65° C. and stirred for 1.5 h. To the mixture was added water (2136 mL) over 2 h and the suspension was stirred for 1.5 h. The mixture was cooled to 20° C. and stirred for 14 h. The solid was collected by filtration and the filter cake was washed with water (13 mL), dried under vacuum at 45-50° C. for 12 h to afford 2-aminopyrimidin-5-ylboronic acid III (23.6 g, 42% yield)

Workup

  1. additionwas charged over 30 min
  2. temperaturewhile maintaining the temperature between −60° C. and −70° C
  3. additionwas charged over 1 h
  4. temperaturewhile maintaining the temperature between −60° C. and −70° C.
  5. temperaturewhile maintaining the temperature between −60° C. and −70° C.
  6. temperaturewhile maintaining the temperature between −60° C. and −70° C.
  7. stirringthe reaction mixture was stirred for 1 h
  8. waitAfter being aged at 0-5° C. for 30 min
  9. customthe resulting layers were separated
  10. additionTo the aqueous layer was added water (420 mL) over 30 min
  11. additionfollowed by addition of tert-butyl methyl ether (822 mL)
  12. temperatureto warm to 20-25° C.
  13. stirringwas stirred for 30 min
  14. customThe layers were separated
  15. washthe aqueous layer was washed with tert-butyl methyl ether (5×700 mL)
  16. temperatureThe aqueous layer was cooled to 0-5° C.
  17. addition35% aqueous hydrochloric acid solution (137 mL) was added over 1 h
  18. temperaturewhile maintaining the temperature between 0-5° C
  19. stirringThe mixture was stirred at 0-5° C. for 1.5 h
  20. filtrationfiltered
  21. washwashed with water (14 mL)
  22. customthe cake was dried under vacuum at 45-50° C.
  23. customto afford the crude product (26.7 g)
  24. stirringthe mixture was stirred at room temperature (rt) for 20 min
  25. temperatureThe mixture was warmed to 65° C.
  26. stirringstirred for 1.5 h
  27. stirringthe suspension was stirred for 1.5 h
  28. temperatureThe mixture was cooled to 20° C.
  29. stirringstirred for 14 h
  30. filtrationThe solid was collected by filtration
  31. washthe filter cake was washed with water (13 mL)
  32. customdried under vacuum at 45-50° C. for 12 h

Sources & evidence

ORD record
ord-68022d50344d4fe99e785661fd42fbf5
Source dataset
uspto-grants-2014_11
Patent number
US08895729B2

Reaction notes

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